Oncorhynchus mykiss (rainbow trout): 110538653
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Entry
110538653 CDS
T07259
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
omy04010
MAPK signaling pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
110538653
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110538653
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110538653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
omy04050
]
110538653
04090 CD molecules [BR:
omy04090
]
110538653
Cytokine receptors [BR:
omy04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
110538653
CD molecules [BR:
omy04090
]
Proteins
110538653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
SLC52_ribofla_tr
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
110538653
NCBI-ProteinID:
XP_021481282
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All DBs
Position
12:complement(82708968..82756710)
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AA seq
345 aa
AA seq
DB search
MAGTLSLVMLFGVVGVLVASKMERAVQVPCDSGQYTNGGECCEVCPPGEGVVRRCGANQT
VCAQCLDSETYSETYSHIDTCIPCTMCTGLMRMQTPCTDSNNAICVCDYNYYLNEVSGRC
EPCTVCPAGQGVLAHCEHNHDTVCEECIDDTYSDRDSSLDPCLPCTICDEGIEVELSACT
PVSDSLCHNPLLPSYTSPTTPLDRSSPSFTDIFPPDSSSSPSPGGESTTAQPSPHFIRPG
FNENLIPIYCSILAAVVVGLVAYIVFKRWNSCKQNKQPANNHQVTAANQTVTPEGEKLHS
DSGISVDSQSLQEQQHAAQAQTQTHRQEQIVVRVDGGPDSPPPQV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaccttatcattggtgatgttgtttggagtggttggggtattggtggcttct
aagatggagcgggcggtgcaggtgccctgtgactcaggccagtacaccaatggtggagag
tgctgcgaggtgtgcccacctggagagggggtggtgaggaggtgtggtgccaaccagacc
gtctgcgcccagtgcctagacagtgagacctactcagagacctacagccacatagacacc
tgtatcccctgcaccatgtgtacaggtctgatgcgcatgcagacgccctgcactgactcc
aacaatgccatctgcgtgtgtgactacaactactacctgaatgaggtgtctgggcgctgt
gagccctgcacggtgtgcccggcgggccagggcgtgttggcacactgcgagcacaaccac
gacacggtgtgtgaggagtgtatagacgacacctactctgaccgggacagctccctggac
ccctgcctgccctgcaccatatgtgatgagggcatcgaggtggagctgagcgcctgcacc
cccgtcagcgactccctctgccataatcctctcctcccgtcctacacgtctcccaccact
cccctggaccggtcttccccctctttcacagacatcttcccaccagacagctccagcagc
ccctccccggggggagagagcaccacggcccagcccagccctcacttcatcagaccgggc
ttcaacgagaacctcatccccatctactgctccatcctggctgctgtggtggtggggctg
gtggcctacatcgtcttcaaaaggtggaacagctgcaagcagaacaaacagccggctaac
aaccaccaagtcacagcagccaatcaaacggtgacgccggagggggagaagctgcacagc
gacagcggtatctcagtggacagccagagtctgcaggagcagcagcatgcagcccaggcc
cagacacagacacacagacaggaacaaatagtggtgagggtggatgggggacctgactca
cctcccccccaggtctga
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