Oncorhynchus mykiss (rainbow trout): 110538662
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Entry
110538662 CDS
T07259
Name
(RefSeq) homologous recombination OB-fold protein isoform X1
KO
K27803
homologous recombination OB-fold protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110538662
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110538662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HROB
Motif
Other DBs
NCBI-GeneID:
110538662
NCBI-ProteinID:
XP_036794711
Ensembl:
ENSOMYG00000008901
LinkDB
All DBs
Position
12:82838617..82846704
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AA seq
642 aa
AA seq
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MTAMTCKWNGLFNVGEDFDDEDLLEMDWSAPSVSACTVSSAAQSCFLRSTAASTPAAPYG
QNNSHQPSTEGLLAHRGLSNGPGSDNSTPNSVGQSPALGLRLLSTSKPLPSFPLPPLHLP
TLSRGLCTVTQQSSSPAQQMKSNTTGQQEAPSPQDDFDDWDVDLADLDESDPQMSTWAQV
RETASAADLTKPSDDSVSPAKRLRPTACGGAQTGPNVGLRGFSTSNQMSGLPSSSSILHR
SSFPGPFPSPRPDPRATFLLAPPQSPVLSGLTKASSPFPRPVTPRPVRGLPSQVQRPWAT
PLAQGRSLFDPISPAPSSRFGEPMPSPSLTPRSLHPPIFTNHLIQLVSNSNKTPQRPGSD
HIRPNTRRFPGPAGILPQQQLHGQSLDDIVVAIPQTPAHGAVARMPSQVPSSQTEEEDFS
GGPWAAMKAEMGLDERNSSCFLHSYSVAMVLRKAALKQLVKNKVPNMAVVLKSILHTHAD
AKAVFRDPTGEMQGTVHRRLLEDRLGELKTGAVLLLKQVGVFSPSHRNHYLNVTPNNLLR
IYPPDGSTLSSTQSQLLPLPPEPMLESSDQSSSVPGAPVSQMELFYDNDDEEDVRAPQVS
ADSGAGSSSVPQGPPAAPLDLSWDADDLDELLGELPVESYCL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgactgctatgacttgcaagtggaatggattatttaacgttggggaggacttcgatgat
gaggatctacttgagatggactggtctgctccatcagtgtctgcttgcactgtgtcctct
gcagcacagtcctgtttcctccgttcaactgcagcatcaactcctgctgccccctatggc
cagaataactcacatcaaccatccacagaaggcttacttgcccataggggcctgtcgaat
ggcccagggtcagataattcaacaccgaacagtgtaggacagtctcctgctttgggtttg
agactgctctctacatctaaaccattgccctcattccctcttccccctctccaccttcct
acactgagtaggggactgtgtacagttacccaacagagctcctcaccagctcaacagatg
aagtcaaacacaacaggacagcaagaggccccctcgccgcaggatgactttgatgattgg
gatgttgacctggcagacctagatgaaagtgacccacagatgagcacttgggctcaggtc
cgagaaactgcttcagctgcagatctaaccaagcccagcgatgactctgtatccccagcc
aaaagactacggcccacagcctgtggtggtgctcaaaccgggcccaatgtgggtctgaga
ggattcagtacctctaaccaaatgtctggtcttcccagtagtagtagtatactccacagg
tcctcattccctggtcccttcccctctccccgccctgatcctagggctaccttcctccta
gctccaccccagagcccagtgttatctggcctcaccaaggcctccagccccttccccagg
cctgtgacccccaggccagtcagagggcttccttcccaggtacagaggccctgggctaca
cctctggctcagggacgcagcctttttgaccccatctccccagccccctctagtaggttt
ggtgaacccatgccttcccccagtctcaccccccgttccctccacccgcccatcttcact
aaccacttgattcagctggtgtccaactccaacaagaccccccagagaccgggttctgac
cacatccggcccaatacccgccgcttccccgggcctgcaggaatcctaccacaacagcag
ctccatgggcagagcctggatgacatcgtggtggccattcctcagacacctgcacatggg
gccgtggctcgaatgcccagtcaggttcccagctctcagactgaggaagaggatttcagt
ggaggtccgtgggcagcgatgaaggcagagatgggattggacgaaaggaactcctcctgt
tttctgcactcttacagcgtggccatggtactccgcaaggcggccctgaaacagctggtg
aagaacaaggtccccaacatggctgtggtactaaagagcatcctccacacacacgctgat
gccaaggctgtgttcagggatcccacaggagagatgcagggcacagtgcaccggcgcctc
ctagaggacagactaggggagctcaagacgggggcggtattgctgctcaaacaggtgggt
gtgttctcaccatcccaccgtaaccactacctgaacgtgacacccaacaacctcctgagg
atctaccctcctgacggctcgaccttgtcctccacacagagccagctgctcccactcccc
ccggagccaatgttggaatcatctgatcagtcctccagtgtcccaggagcccctgtgtct
cagatggagttgttctatgataatgatgatgaagaggatgttcgggccccacaggtctct
gcagactctggtgctggctcctctagtgttccacagggcccgcctgctgcaccactggac
ctgtcctgggacgcagatgaccttgatgagcttcttggggagttgcctgttgagtcctac
tgcctctga
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