Oncorhynchus mykiss (rainbow trout): 110538686
Help
Entry
110538686 CDS
T07259
Name
(RefSeq) long-chain fatty acid transport protein 1 isoform X1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320
PPAR signaling pathway
omy04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110538686
09158 Development and regeneration
04382 Cornified envelope formation
110538686
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
omy01004
]
110538686
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110538686
Lipid biosynthesis proteins [BR:
omy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110538686
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
110538686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110538686
NCBI-ProteinID:
XP_021481328
Ensembl:
ENSOMYG00000017709
LinkDB
All DBs
Position
12:84173660..84187514
Genome browser
AA seq
648 aa
AA seq
DB search
MRNAASASFSLGSLGLLRLFGVPWSWSLAAGFGVFLGTGGWKYLYIVVRTAKRDLNGLYV
LLRVKIALWHHLRRNSNIPSIFAQTVKQHPNKPALIYDATGETWTFTQLDLLSNAVAQWA
LAQGWAPGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDALLHCVGVSVSRGIV
FGAELAGAMLEVSSSLSPSMVRFCTGELSVDCLASLAAQNLDYILASAPTLPPPPCIPPK
SFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHAFRMRQDDIIYDCLPLYHSAGNI
MGVGQCLINGLTVVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSEKGHRV
RLAVGNGLRPSVWEAFTERFGVAQVGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
ICLMKVDEETTELVRDRHGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIAN
NVFKKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGTLSGLLGQADVA
VYGVAVPDVEGKAGMAAIADPTGTFDCDAFLRVVQQALPPYARPVFLRISPQVDTTGTFK
IQKTRLQREGYDPRLSTDQIYFLNSRAGRYEAVNEELHSAIVEGRMAL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcagcgagtgcctctttttctctgggatcgctgggtctgctgcgtctcttc
ggggtcccctggtcctggagcttagcagcaggcttcggggtctttctgggcacaggtggt
tggaagtacctctacatcgtagtccgtactgccaaaagagacctaaatggcctttacgtg
ttgttacgagtcaagatagccttgtggcaccacctacggcgcaacagcaatatcccctcc
atctttgcccagacggtgaagcagcacccaaataaacccgccctcatctacgatgccaca
ggagagacgtggaccttcacccagctggacctgctgtctaacgctgtggcccaatgggct
ctggcccagggctgggccccgggggatgtggtggccctcttcatggagagccggcctttg
caggtggccctctggctgggtttggccaaggtgggggtggaggcagcactcatcaacttc
aacctgcggagggatgctctcctgcactgtgttggagtgtctgtgtccagagggatcgtg
ttcggagccgagctggctggtgccatgttggaggtgagctcatccctgagcccgtcgatg
gtgcggttttgtacaggagagctcagtgtagactgtcttgcctccctggctgcccagaat
ctggactatatcctggcctctgcccctacactgccccctcctccctgcatcccacccaag
agcttcaatgatcgtctgttctatatatacacctcaggcaccacaggactcccgaaagct
gccatagtggtgcacagtcggtattaccgtattgctgcttttggctaccatgctttccgc
atgcgccaggatgacatcatctacgactgccttcccctctaccactctgcaggtaatatc
atgggtgtaggccagtgtctcatcaatggactcactgtggtggtgaagaagaaattctca
gccagtcgcttctgggaagattgcatcaagcacaactgcactgtggtgcagtacataggg
gagatctgtcgctacctgctgtcccagccggtgcggccatctgagaagggtcaccgggtt
cgcctggcggtggggaatgggctgcgccctagcgtctgggaggccttcaccgagcgcttt
ggggtggcccaggttggggagttctacggagccaccgaatgcaactgtagcatcgccaac
atggacggcaaggtgggagcttgtgggttcaacagccgcatcctgcccaatgtgtaccca
atctgcctcatgaaagtggatgaggagaccacagagctggtgagggacaggcacggcctg
tgtgtgccctgccgtcctggggagccagggctgctggtgggaaggatcaaccaacaggac
ccgctacggaggtttgatggctacgccaaccaggatgccaccaggaagaagattgccaac
aacgtcttcaagaaaaatgactcagcatatctgtcaggggatgtgttggtgatggatgag
ctgggctacatgtacttccgggaccgcagtggagacacgttccgctggagaggagagaac
gtctccaccaccgaggtagagggaacactgagtggtctgctgggccaggccgatgtggct
gtgtatggggtagctgtaccagatgtggaagggaaggcagggatggctgccattgcagac
ccaacagggacatttgactgtgatgcgttcctgcgagtggtccaacaggcccttccccct
tacgcccgtcccgtgttcctacgcatctccccacaagtagacaccacaggtacctttaaa
atccagaagacccggttgcagagggagggatacgatccgcgcttatcaaccgaccagatt
tactttttgaactccagagcagggcgttatgaggctgtgaatgaggagctacacagtgct
atagtggagggtagaatggctctatga
DBGET
integrated database retrieval system
