Oncorhynchus mykiss (rainbow trout): 110538821
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Entry
110538821 CDS
T07259
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110538821
03015 mRNA surveillance pathway
110538821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110538821
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110538821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
110538821
NCBI-ProteinID:
XP_021481472
Ensembl:
ENSOMYG00000003960
LinkDB
All DBs
Position
12:89878153..89884164
Genome browser
AA seq
272 aa
AA seq
DB search
MAPSPTKRKEEEKSKDRGKEKTATKEGGDKERGREKGHKRRSASTGSSSSSSSSSGSSSG
SSSGSSSSGTSRSGSSRSSSSSSSSSSGSPDPGRRRHDNRRRSRSASKTQKKGDDKERRR
RSPSPKPTKVHLGRLTRNVTKDHIQEIFATYGKIKMIDMPVERLHPNLSRGYAYVEFETP
EEAQKALKHMDGGQIDGQEITTSAVLAPRIRPPPRRQSPPRRMPPPPPMWRRTPPRMRRR
SRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcgtaaggaggaggaaaagtcaaaggacaggggaaaagag
aagactgccactaaggaagggggggacaaggagagagggagggagaagggccacaaacga
cgcagtgcatccactgggagcagcagcagctccagcagcagctctggctccagctctggt
tcctccagcggctctagttcctctggcaccagccgctctgggtcttcccggtccagctcc
tccagctcatctagttcctctgggtcacccgaccccggccgccgccgacacgacaaccgt
cgccgctcccgctccgcgtccaaaacacagaagaagggagatgacaaggagcgaaggaga
aggagcccgagccccaagcccaccaaagttcacttaggaagactgaccagaaatgtgacc
aaggaccacatccaggagatctttgccacctacggcaagatcaagatgattgacatgcca
gtggagaggctccacccaaacctgtcccggggctacgcctatgtggagttcgagactcca
gaggaggcccagaaggccctgaaacacatggatggtggtcagattgatggtcaggagatc
accacctctgccgtgttggctccaaggatacgccctccccctcgtagacagtcaccccca
cgcagaatgcccccacctccccccatgtggcgccgcaccccacctcgcatgaggagaagg
tctcggtcaccaaggagacggtccccggtgcgccgacgctccaggtccccggggcgcaga
cgtcatcgttcccgttccagttccaactcctcacgatag
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