Oncorhynchus mykiss (rainbow trout): 110538900
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Entry
110538900 CDS
T07259
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110538900
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110538900
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
DUF808
Motif
Other DBs
NCBI-GeneID:
110538900
NCBI-ProteinID:
XP_021481553
Ensembl:
ENSOMYG00000029124
LinkDB
All DBs
Position
2:24525746..24532113
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AA seq
257 aa
AA seq
DB search
MVSALTRLLLITCVILPFNGAEKLRKALDRKDVEYEKCTGNDADKPNCTRIAAESDSRTS
YLNNMYNSCPQGPAGTPGREGNPGTNGIPGTPGIPGRDGIKGEKGECVSEVFEEPWKPNY
KQCAWNSLNYGIDLGKIADCTFTKLRSDSALRVLFSGSLRLKCKTACCQRWYFTFNGAEC
TGPLPIEFIIYLDQGSPELNSTINIHRTSSVEGLCEGIRAGLVDVAIWVGTCADYPRGDA
STGWNSVSRVFIEELPK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggtatcagctctaactcgtctgctgctcatcacctgcgtgattctacctttcaatgga
gcagagaaattgagaaaggcacttgacaggaaggatgttgaatacgaaaagtgtactgga
aacgatgcagacaaaccaaactgcaccagaatcgctgctgaatccgattcaagaacctct
tatttgaacaacatgtacaacagctgcccccagggtccggctggcacccctggcagggag
ggtaaccctggcaccaatggcatccctgggacccctggcatcccggggcgcgatggcatc
aagggggagaaaggagagtgtgtgagtgaggtgtttgaggagccctggaaacccaactac
aagcagtgtgcctggaactcactcaactatgggatcgacttgggcaagatagctgactgt
acattcaccaagctgcgttcagacagtgctctgcgtgtgctcttcagcggctccctgagg
ctgaagtgtaagacagcctgctgccagcgttggtacttcaccttcaacggagctgagtgt
acaggacctctgcccattgagttcatcatctacctcgaccaaggcagccctgagctcaac
tctaccatcaacatacacagaacctcatcagttgaagggttgtgtgaggggatccgggca
ggcctggtggacgtggctatctgggtggggacctgtgctgactaccccagaggagacgca
tctacagggtggaactctgtatccagggtcttcatagaggagctgcccaaatga
DBGET
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