Oncorhynchus mykiss (rainbow trout): 110538912
Help
Entry
110538912 CDS
T07259
Name
(RefSeq) MHC class II regulatory factor RFX1
KO
K09173
regulatory factor X 1/2/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110538912
Transcription factors [BR:
omy03000
]
Eukaryotic type
Other basic domains
RF-X
110538912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
DUF3176
VanW
Motif
Other DBs
NCBI-GeneID:
110538912
NCBI-ProteinID:
XP_036794909
Ensembl:
ENSOMYG00000010127
UniProt:
A0A8C7VF81
LinkDB
All DBs
Position
12:complement(87316746..87340583)
Genome browser
AA seq
913 aa
AA seq
DB search
MATTGYVGELQPVTTQPQGAASGSVTVAGQSSASAAPHTVVAPTQQFLAQLQTTVGAPAA
AAGHTTPPAQATPTAAQKTAVVQVAPTQVPPPQTQYVTAEIQGSSSQANNAQNAPQYIVV
TVTEGSLHSSDSVSDSSPPPAVVQQTGVPTQVVQQVQAAQQRSVVQATSQITAKTEQGIT
TQLSVTNLQPVHLTQEVQQQLQQVPVQHVYTNQVQYVEGGDNNYTTSTIRSGSFTYTDTP
LYTQTTAAPYYEAPPTSGSQVPTTGTPLTVSVTTGSTGGVSMYVAGTGQIVANPAAASGG
GATVVATGGTANGTGEGAGANGSGGSYVIQGGYMLSGNSQGGYSTHNARSSPATVSTTEG
EEGSGVPSADKKVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS
VFMGLRTRRLGTRGNSKYHYYGLRIKACSSLIRLMEDQQHLAMRQQPFSQKQRMKPVQKV
EGMTNGMAAGSGQQQQQQGAGLSDISAQVQQYQQFLDASRTLPEFPDLDLQGKALPEGIE
LEHIKSFQLLYREHCEAILDVTINLQFTLVETLWKTFWRFEESQSGDTGTLAVHDESEKR
LPKDCLVILCKYDPVLRWSRDCDNTLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESW
LTNAMMNIPEEMVRIKVTSASSFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRV
DFANVQEQASWVCRCEDRVVQQLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQASAA
FPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGET
PIAVMGEFASLGRSLNPLDPDKEEEEEEEEESDDECQELSLPSDGAGLGEESLEPPTKLA
RTDQRVLFTTGQD
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggccacgacaggctacgttggggagttgcagcccgtgacgacccagccccaaggggca
gcgagtgggagtgtgacggtggctggacagtcctcagcatccgctgccccacacaccgtg
gtagctcctacgcagcagttcctggctcagcttcagaccacagtgggggctcctgcagcc
gcagcaggacacaccacaccccctgcacaagccactcccacagcggcacagaagacagca
gttgtccaggtggcgcccacacaggttcctcccccccagacccagtatgtgacggctgag
atccagggttcctcatcacaggccaacaacgcccagaacgccccccagtacatcgtagtc
accgtcacagagggctctctccattcaagtgactctgtgtctgactcgagccctcctcca
gctgtggtacagcagactggggttcccacacaggtggtgcagcaggtgcaagcagcacag
cagaggtcagtggtgcaggcaacgtcccagatcacagccaagactgaacagggtatcacc
acccagctgagtgtcaccaacctgcagcctgtccacctcactcaggaggtgcagcagcag
ctccagcaggtgccagtgcagcatgtgtacaccaatcaggtgcagtatgttgaaggggga
gacaacaactacaccaccagcacaattcgttcaggcagcttcacctacacagacacccct
ctgtacactcagaccaccgccgccccttactacgaagcccctcccacctctggctcacag
gtccccaccaccggcacacccctgaccgtctccgtgacaacgggctccaccggtggagtg
tctatgtacgtggctggcacaggccagattgtggccaatccggcggccgcctctgggggt
ggggcgacggtggtggcgacagggggaacagccaatgggactggggaaggggcgggggct
aatggaagcgggggcagctatgtgatccagggggggtacatgctgagtggcaacagtcag
gggggctactccacccacaacgcccgctcctctcctgccaccgtcagtacaacagagggc
gaggagggtagtggcgtaccgtcggcagacaaaaaggtgcagtggctgctagataactat
gagacagctgaaggggtcagtctgcctcgctccaccctctactgccactacctgctgcac
tgccaggagcagaagctggagcccgtcaacgctgcctcctttgggaagctgatcagatcc
gtgttcatggggctacgcacgcgccgcctgggcacccgggggaactccaagtaccactat
tacggcctgaggatcaaggcctgctcctctctgatcagactgatggaggaccagcagcac
ctggccatgagacagcagcccttctctcagaaacagaggatgaagccggtgcagaaggtg
gaggggatgaccaatggcatggcggcaggctcgggccaacagcagcagcagcagggggcg
gggctctctgacatcagcgcccaagtgcagcagtaccagcagttcctggacgcgtctcgg
accctcccagagttccctgaccttgacctgcaggggaaggccctaccggagggcatagaa
ctggagcacatcaagagcttccagctgctgtatcgggaacactgtgaggctattctggac
gtgacgatcaacctgcagttcaccctggtggagaccctgtggaagaccttctggaggttt
gaagagagccagagtggagacactggcacactggctgtacatgatgagtctgagaagcgc
ctgcctaaggactgtctagtgatcctgtgtaagtacgaccctgtgctccgctggagccgc
gactgtgacaacaccctgtaccagggcctggtggagatcctcatccccgatgtgctgcgg
cccatccccagtgccttaactcaagccatccgcaactttgccaagagtctggagagttgg
ttgaccaacgctatgatgaacatcccagaagagatggtccgcattaaggtaacgtcagcc
agttcgtttgcccagacgctgcgcaggtacacctctctgaaccacttggcccaggcagcc
agggccgtgctacagaacacagctcagataaaccagatgctcagcgacctcaaccgcgtg
gacttcgccaatgttcaggagcaggcgtcgtgggtgtgtcgctgtgaggaccgtgtggtg
cagcagttggagcaggacttcaagctgaccctgcagcagcagaactctctggagcagtgg
gctgcctggctggacggggtggtctcccaggtcctaaagccctaccaagccagcgccgcc
ttccccaaagcagccaagctcttcctgctcaagtggtccttctacagttccatggtgatt
agagacctgactctgcgtagtgctgccagctttggatccttccacctgatcagactgctg
tatgatgagtacatgtactacctgatagaacacagagtggcccaggctaaaggagagaca
cccatcgctgtcatgggagagttcgccagtcttggcaggagtttgaacccactggatcca
gacaaagaagaggaagaggaggaggaagaggagagcgatgacgagtgtcaggagctgtct
ctgccctctgacggggcggggctgggggaggagtctctggagccgcctaccaagctggcc
agaaccgaccagagagtactcttcaccacgggccaggactga
DBGET
integrated database retrieval system
