KEGG   Oncorhynchus mykiss (rainbow trout): 110538942
Entry
110538942         CDS       T07259                                 
Name
(RefSeq) interferon epsilon
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060  Cytokine-cytokine receptor interaction
omy04217  Necroptosis
omy04620  Toll-like receptor signaling pathway
omy04621  NOD-like receptor signaling pathway
omy04622  RIG-I-like receptor signaling pathway
omy04623  Cytosolic DNA-sensing pathway
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110538942
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110538942
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110538942
   04621 NOD-like receptor signaling pathway
    110538942
   04622 RIG-I-like receptor signaling pathway
    110538942
   04623 Cytosolic DNA-sensing pathway
    110538942
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110538942
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 110538942
NCBI-ProteinID: XP_021481585
LinkDB
Position
12:66011207..66012308
AA seq 177 aa
MATLNVSFVVHLLCIIVFYPAVYAKCSAPKVQKYYLSQTHQTLNDLAEERLPRGCIPEAE
RLRVQRPALPIEEGEKVWTLRLAFQLASELFQQNLTLVKWNSVKLRDLQDLLARQNMTYS
ECVRDMSVHLNLPIKNYFKELEDFLSHERFSACSWELVRAEMGSIISQAIRNAKKHV
NT seq 534 nt   +upstreamnt  +downstreamnt
atggcaactcttaacgtgtcctttgtggtacatcttctgtgtataattgttttttacccg
gctgtgtatgctaaatgcagtgctccaaaagtgcaaaaatattatctttctcaaactcac
cagaccctcaatgatcttgccgaggagaggttaccaagaggctgtatcccagaagctgaa
aggttaagggtccaacgtccagcgcttccaatagaggagggggaaaaggtttggacactg
agacttgcgtttcaactagccagcgagctcttccaacaaaacctaactcttgtgaaatgg
aattccgtcaaactcagggaccttcaagaccttcttgctcgacaaaatatgacctattcg
gaatgtgtgagagacatgagtgtgcatctaaaccttccaattaagaactacttcaaagag
ctggaagactttctttcacatgagcgtttcagcgcgtgctcatgggagctcgtgagagct
gaaatggggagcatcatttcacaagcaatcagaaatgccaagaaacacgtgtga

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