Oncorhynchus mykiss (rainbow trout): 110538950
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Entry
110538950 CDS
T07259
Name
(RefSeq) supervillin isoform X1
KO
K10369
supervillin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110538950
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
110538950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gelsolin
VHP
DUF7904
Motif
Other DBs
NCBI-GeneID:
110538950
NCBI-ProteinID:
XP_036794068
LinkDB
All DBs
Position
12:complement(68795169..68831789)
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AA seq
1709 aa
AA seq
DB search
MDTIENPDLEPRSERIARYKAERRRELQERYGNMEELPSKWVRRDGALMNSDSAPPSTDR
TLSGGLNGRAGGPEGGQRGLHLESNTPLESEPRRFSNGFEADTGADPTYLQRKCSSDSAG
VLSGVEPLAPPGTPGPDAAQLQTRVSVGQLRCALLQQTGTGTQPEKVSPDSGRAASSLDL
AVKPGSEGGRRRTRRYVPGVSGGGSKTNERFRTQPITACEVQESGGLLEEENAKADVKTD
DRAKMSVAAKMSLFKELEKSAAPEASSFLKPRSGSVAYERRVRRGNEHRSLTQPITCEEM
VVATSTPQPAESGEAQAVQAEAEAGEDDENNKLTMSEKLALFNKLSLPGNLGDAAPHAPP
ERRRQKGARYRTQPITVEEVSLLQKGPIRLPPLRLSPTLSDRQQEQSINLRPSEVRQAQP
RPGADVEPATGPDPSQQGQQQRRDSEPGEIRGILRNSASGAPVRDRDRDTMWEDRQQDQD
GGGERGNKVEERRAERHDNVPVPCRERPASSAPWRQRNRNRRETVAVCSPARPSSEQGHP
QEERPSLAEQRKQMDPPGNTSGRDRLSDASREEGEEEKGGRVRRDTPPRQHVQVTLADQR
KEDNEISHDAPVVNPQCWVPVFSSVYSNSTPQYVMCYNQTSSSYEAQEVSSPTQVCSQPQ
WRQKQTRPVEAEELPQASVAERMRTLQDSEEQWKTRGRGAANDSAQYTVAGRMAKRGLVT
PVSDIDETPPSHTKRPSTGATATACPYEEISSHPGMEVDEDTKLDKLDSIVDRLNTAPQD
TPLEVTSVGEKEVMTPDDQETCGGFYREVSPHSPSALPAGAGAATGTDPEQDLSALCQTN
TPMLTSEVAQHRRSVRPSRRTQGSRNPLRALAARDDIRQDFMGERVTMASVNTNRTQVEK
SGLASTEDFSNIHLRDVTSTESVRNSNNLPISNLMLIHIKGWHHVQVRLVEPTARSLNSG
DCFLLVTPTHCILWSGEFANATEKAKASELASLIQTQGDLGCLACEVIHLEEGVNTDNSL
ASDFWNLLGGKTQYRGAGAPEEDELYESGVVESNCLYRLVENRLVPHEQAWAAIPTVSLL
GSTEALVFDFGSEVYLWHGKDVASGDRSVAVQLAQQVWGGPYDYSNCRVNPLDPTHCNPS
IQPQGERRPNWALFVCVSEHKETALFREKFLDWATDKEEMAAMVVEEAQTAMPVWPQQSP
LPQQPQQQIECVSLCACDAKALVAGQGVALPGDGVVSTVLEGVDVQRGHGVVPLEDGRQV
ELSTVAVDTWHIQEFEDSEAQLESPGQLHEGDTYLIRWTYTLSPVDESGQPGRECSAVFI
WQGRHSSNNGRGASALRSHEGTQVRVPQGQEPPCFLQLFQGGLVIHKGCRADTTNNTGVW
RLFCVRGELPEEASLLEVDCSCGGLRSRGSLILLNGQQGALYLWYGCKVHASSREAGKRA
VERLTQMCPPELGLSSDSLSRVQEVEEGAEPVEFWNAIGQQDRKTYDCMLQDPGKYNFTP
RLFHLSGRSGTFQGEELQSPARLPGVVMAMPFVQESLYFVPQPALFLLDNCMELYLWQAG
EPEDSQTTGSACIRWANERRCAMQTVLHYCKERNPRRPLQAYLIQDGVEPLTFTNVFPRW
EKRPTPTTQGEAGRVKLTLVQDALAQLSKTQYPLEELLQTPLPEGVDPQRLEIYLSDHDF
QTILKMKRDEYDSLPNWKQVSLKKSKGLY
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggacactatcgagaaccccgacttggagcccagatcggagcggatcgcccgctacaag
gccgagaggaggcgggagctgcaagaacgctatggcaacatggaggagctcccatccaag
tgggtgaggagggatggggctctcatgaactcagacagtgcacctccctccacagacagg
accctctctggggggttgaacggcagagcgggggggccggagggtggccagaggggcctc
cacttggagagcaacacccctctggagtcagaacctcggagattctccaacggctttgag
gcagacaccggtgcagacccaacatacctccaaaggaagtgttcttctgactctgccggc
gtgttgagtggggtggagcccctagctcccccaggcacccctggacccgacgcggcccag
ctgcaaacgcgggtgtcggtgggccagttgaggtgtgccctgctgcagcagactgggact
ggaacacagcctgagaaagttagtcctgacagtggccgtgcggcctcttcccttgacctg
gctgtaaagccgggctcggagggggggcggcggcgcacccgtcgctatgtccctggggtg
tcaggcgggggcagcaaaaccaacgagcgcttcaggacacagccgatcacagcctgtgag
gtgcaggagagtggcgggctgctggaagaggagaacgctaaagctgatgtgaagacagac
gacagagccaagatgagtgtggcggccaagatgtctctgtttaaagagctagagaagtca
gcagcccctgaggcctcctcctttctgaagcctcgctctggcagcgtcgcgtatgaacgc
agagtacgccgtggcaacgagcaccgctcactcactcagccaatcacctgtgaggagatg
gtggtggccaccagcaccccccagccagcagagtcaggcgaggcccaggctgtgcaggcc
gaggcggaggcaggggaggacgatgagaacaataagctgactatgagcgagaagctggct
ctgttcaacaagctgtccctgccagggaacctgggggatgccgctccccatgccccccca
gagagacgcaggcagaagggggcacgctaccgcacacagcccatcaccgtggaggaggtc
agcctgctccagaaaggccccattcgactgcccccgctgcgcctgtcccccaccctgtcc
gacaggcagcaggagcagtccatcaatctgaggcccagtgaggtgcgtcaggcccagcct
cgacccggggccgatgtggagcctgccacaggacctgacccgtcccagcagggccagcag
cagcgcagggactctgagccaggagagatcagaggcatcctgaggaacagcgcctctgga
gcaccagtacgggatcgagacagagacactatgtgggaggacagacagcaggaccaggac
ggaggaggggagagggggaacaaggtggaggagaggagggcagaaagacatgacaatgta
ccagtgccttgtagagagagaccagcctcctcggccccctggagacagaggaacaggaac
aggagggagacggtggccgtgtgtagcccagccaggccctcctcagagcagggtcacccc
caggaggagaggccttccctggctgaacagagaaagcagatggacccccctgggaacacc
tctgggagagacaggctgtcagatgcttccagggaggagggagaggaggagaaggggggc
agggtgagaagagacactcctcccagacaacacgtccaggtgaccttggcggaccagagg
aaggaagacaatgagatctcccatgatgcaccagtcgtcaaccctcagtgctgggttcct
gtcttttcctctgtctattctaacagtacacctcaatatgtcatgtgctacaatcagacc
agctcttcctatgaggcccaggaggtctcctctcctacccaggtgtgctctcagccccaa
tggagacagaagcagactagaccagtagaagcggaggagctgccacaggcgtcggtggct
gagcgcatgagaaccctacaggacagcgaggagcagtggaagaccagagggagaggagcc
gccaacgactcagcccagtacactgtggccggacgcatggcgaaaagaggtttggtgacc
cctgtatcagacatagacgagacccctccatctcacactaagagaccctccacaggagcc
acagcaacagcatgcccatatgaagagatctccagtcaccctgggatggaggtggacgag
gacacaaagctggacaaactggattccattgtggacaggttgaataccgctccccaggac
acgcccctggaggtgacctcagtgggggagaaggaggtcatgacccctgatgaccaggag
acatgtggtggtttctacagggaggtgtctccccactcaccctctgccctccctgctggg
gctggagctgccactggaactgacccagaacaggacctgagtgccctctgccagaccaac
acacccatgctgacatcagaagtagcgcagcacaggcggtcggtgcgtccgtcccgtagg
acccagggctcccggaaccctctgcgtgctctggcggcccgcgatgacatcagacaggac
ttcatgggcgagagagtcaccatggcttccgtgaacactaacaggacacaagtggagaag
tcaggtctggccagtacagaggacttcagtaacatccaccttcgtgatgtcacttccaca
gaatcagtgaggaacagcaacaacttgcccatcagcaacctcatgctcattcacatcaaa
ggttggcatcatgtgcaagtgcgtctggtggagcccacagccaggtctctgaacagtgga
gactgcttcctgctggtcacacccactcactgcatcctctggagcggagagttcgccaac
gccacagagaaagccaaggcgtcagagctggcctcgttgatccagacacagggggacctg
ggctgcctggcctgtgaggtcatccacctagaggagggggtcaatactgacaacagcctg
gcctctgacttctggaaccttctgggaggaaagacacaatacagaggagcgggagcccca
gaagaggatgagctgtatgagagtggggtggtggagtctaactgtttgtacaggctggtg
gagaacagactggtaccccatgagcaggcctgggcagccatccctactgtctccctactg
ggatccactgaggccctggtgtttgactttggcagcgaggtgtacctgtggcatgggaag
gatgttgcctctggtgacaggagtgtggctgtacagctggcccagcaggtgtggggtggt
ccctacgactatagcaactgtagggtcaacccactggaccccacacactgcaaccccagc
atacagccgcaaggtgaaagacggcccaactgggccctgtttgtctgtgtctctgagcac
aaggagacagccctcttcagggagaagtttctggactgggctacagataaggaggagatg
gctgcaatggtggtagaggaggcacagactgccatgccagtgtggccccagcagagtccc
ctgccccagcagccccagcagcagatagagtgtgtctctctgtgtgcgtgcgatgccaag
gcgctggtggcagggcagggggtggcgctgccaggggacggggtggtctctacagtcctg
gagggggtggacgttcagagggggcatggggtcgtacccctggaggacgggcggcaggtg
gagctgagcactgttgccgtggatacctggcacattcaggagtttgaggacagcgaggct
cagctggagagcccagggcagctgcatgaaggagacacgtacctgatccgctggacctat
actctcagcccagtggatgaaagcgggcagcctggaagggagtgctctgctgtcttcatc
tggcagggccggcactccagtaacaatgggcgaggcgcgtctgcactcaggagtcatgag
ggaacacaggtgagggtgcctcaggggcaggagcctccgtgtttccttcagctcttccag
ggaggtctggtcatccacaaaggctgccgagcggacaccaccaacaacacaggggtctgg
cgtctgttctgtgtgcgtggggagctgcctgaggaggccagtctgctggaggtggactgt
agctgtggcggcctgcgctcccgaggttctctcatactgctcaacggtcaacagggggcg
ctctacctgtggtacggctgtaaggtccacgccagctcccgggaggcgggcaagagggct
gtggagcgactcactcagatgtgccctcctgaactgggcctcagcagtgatagcctttcg
agggtgcaggaagtggaggaaggggcggagcctgtggagttctggaacgctattgggcag
caggacaggaagacctatgactgcatgctgcaagatccagggaagtataacttcacgcca
cgcctcttccatctgagcggccgttccggaaccttccagggggaggagctgcagagccct
gcacggttgccaggggttgtcatggcgatgccctttgtccaggagagcctgtactttgtg
ccacagccagccctgttcctgctggataattgtatggagctgtatctgtggcaggcaggt
gagcctgaggacagtcagaccactggctcagcctgtatccgctgggcgaatgagaggagg
tgtgccatgcagacagtgctccactactgcaaagagaggaacccgaggcgcccccttcag
gcctacctcatccaggacggagtagaacccctcaccttcaccaacgttttccctcgctgg
gagaagagacccacacccaccacacagggggaggccgggcgggtcaagctgaccttggtg
caggacgccctggcccagctcagtaagacccagtaccccctagaggagctgctgcagacc
cctctgcccgagggagtggacccccagcgcctggagatatacctctccgaccacgacttc
cagactattttgaagatgaagagagatgaatatgactccctcccaaactggaaacaagtc
agcctgaaaaaaagcaaaggactctattga
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integrated database retrieval system