Oncorhynchus mykiss (rainbow trout): 110539034
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Entry
110539034 CDS
T07259
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110539034 (ascc3)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110539034 (ascc3)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110539034 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
110539034
NCBI-ProteinID:
XP_036799292
Ensembl:
ENSOMYG00000029552
LinkDB
All DBs
Position
2:25151016..25291524
Genome browser
AA seq
2209 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQEDFTEEVYDLKTKRLKRQELFSREGLTWQKIVQFFTQHLEK
AEQQAAAQELKSILQAAKQIVGTEHGQDTIESAAVFLFETFHNKDHVGHEETRAIKQMFG
PFPSSAADASCAAVSRAVAPLEESQVEEFVRSQSSCRAPQRGSAFGRNITFSYDCYTLDP
QEALPWAGGPEDETPGGGLDFHSFLNNHQGRRGNGGEADGGRLSPGGAQSSGDGTILRGE
VEKYLNGGNMISSSPEELCTSLFEMLASTKSDDELQNELFELLGPEGFEMISVLLQRRSS
IVDSLLSIPADRINYPPDGSRGGEGGSKPTYGCQVTIQSGKEKEMMKMHRREEKRERKRG
ERRWDDTESSSDLYFDPKEMRAQREQALLTARRSPVLSRERVYERIRYPNVYDCYAEATK
TSAFVGGAKLMLPEGIKRENNKMYEEVAIPPSDPMSIGFEEKPIYISELDEIGQLVFKGM
QRLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKI
VYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTR
KSVGDVALSQIVKLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPN
YLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKTTNKIQQLHDMEEVCYEKVLEQIR
NGHQVMVFVHARNATVRTAMGLIEMAKNRGESSFFQPDHGPDYGQCEKSIQRSRNKQMKE
MFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVNLPAHAVIIKGTQIYDA
KRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYLTLLTQQNPIESQFLET
MADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGINHKAYQMDPGLELYRKEL
VVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTMETFNELFNSQKTEADILS
IVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGKINILLQTYIGRGEVDSF
SLISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGFAHPLRQFSIL
PHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGLKVKQCVHQIPSILMEATIQPITR
TVLRVRLQITPDFQWHDQCHGSVGEPWWLWVEDPINDHIYHSEYLLLQKKQVVSGEPQQV
VFTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPITAL
GNLEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNQYPTS
KVVYIAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAAADLIVTTPEKWDG
VSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTNKTVRVVGLSTAL
ANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRSHS
PAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDETQMTDIIATVRESNLKLTLA
FGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDGKTR
RYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSD
HLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDISHETINKYLSNLVERSLR
DLECSYCMEIGEDDCTIEALTYGRISSYYYLKHQTVRMFKERLRAELPIQDILSVLTDAE
EYAELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYGTDT
KTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWLNDSSILTLPTIEQQHLY
LFSRWSSKGGKGGARGFHGPIEGLPELIATCEGRENTFAAIVGEELQPHQISQAWSFLSH
LPVVEVRLSVKGWWEGCGEQTERPLPAAGGKLRDDRSWLEVHADQEYVLQVSLQRINTGQ
QKRKHDTKAQAPRFPKSKDEGWFLVLGEVERRELLAVKRIGYCRHRSTVSLAFYTPVKTG
KCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAMGGMSVK
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccccggctcaccggcgccctgcgctccttctctactgtcagcaagcaggaa
gacttcactgaagaagtatatgatctgaagaccaagcgtctgaagaggcaggagctgttc
tccagagagggcctgacatggcagaagatagtccagtttttcactcagcacttggagaag
gcagagcagcaggctgcagcacaggagctgaagagcatcctacaggctgccaagcagata
gtggggacagagcatggccaggacaccattgagagtgctgctgtcttcctgtttgagacg
ttccacaacaaggaccatgtgggtcacgaggagacgagggccatcaagcagatgtttggg
cccttcccttcctcggcagctgacgcctcctgtgctgctgtgtcccgggctgtggcccct
ctggaagagtcccaggtggaggagtttgttcgttcccagagctcctgtcgcgcccctcag
cgcggctcggccttcggacgcaacatcaccttctcctatgactgttacaccctggacccc
caggaggccctgccctgggcggggggccctgaagacgagacccctggtggaggcctggac
ttccacagcttcctcaacaaccaccaaggtcgcaggggtaatgggggagaggcggatgga
ggcaggctaagcccgggaggggctcagagctctggggatgggaccatcctgagaggggag
gtggagaagtacctgaacggaggcaacatgatctcctccagccctgaggaactgtgcacc
tccctgtttgagatgctggcctccaccaagagtgacgacgagctgcagaatgagctgttt
gagttgctgggcccagagggatttgagatgatctctgttctcctccagagaaggtcttct
atcgtggactctctcctttccatccctgcagacaggatcaactacccaccagatggtagc
cgtggaggtgaagggggcagcaagcccacgtacggctgtcaggtgaccatccagtcgggg
aaggagaaagagatgatgaagatgcaccggagggaggagaagcgggagaggaagaggggg
gagagacgttgggatgacaccgaatcctcttccgacctctactttgaccccaaggagatg
agagctcagagagagcaggccctgctgacagcacggcggtctccagtgctgagcagagag
cgggtgtacgaacgcatccgctaccccaacgtctatgactgctacgccgaggccaccaag
acctccgccttcgtagggggagccaagctgatgttacccgaggggataaagagagagaat
aataagatgtatgaagaggtggcgattcctcctagtgatcccatgtccatcggctttgag
gagaaacccatctacatctctgaactggacgagattggtcagttggtgtttaaggggatg
cagcgtctgaacaggatccagtccatagtgtttgagacagcctacaacaccaatgagaac
ctgctcatctgtgcccccaccggagccggcaagaccaacatcgccatgctgacagtcctc
catgagatcagacagcacctccaacctggaggggtcatcaagaaggatgagttcaagata
gtgtatgtagctcctatgaaggccctggcagcagagatgacgaactacttcagtaagcgg
ttggagccactgggcattgctgtcaaagagctcactggagacatgcagctaaccaaaggg
gagatcctgcgtacacagatgctggtgaccacccctgagaagtgggacgtggtgaccagg
aagagcgttggagacgtggccctgtcccagattgtaaagctcctcatcctggacgaggtg
catctgctacacgaggacagaggaccagttctggagagcctggtggccaggacactacga
caggtggagtcaacccagagtatgatccgtatcctgggtctgtcggccacgctgcccaac
tacttggacgtggcctccttcctccatgtcaacccctacatcggactcttctacttcgac
agccgcttcagacccgtgcccctcggacagagcttcgtcggcatcaagaccaccaacaag
atccagcagcttcatgatatggaggaggtttgctatgagaaggttctggagcagatcaga
aatggacatcaggtgatggtgtttgtccatgctcgtaatgccacggtgaggacagccatg
gggctgatcgagatggctaagaaccggggagagtcttccttcttccagccagaccatgga
cctgactacggccagtgtgagaaatcaatccagcgttccaggaacaagcagatgaaggag
atgttcccagatggttttgggatccaccacgctgggatgctgcgtgctgaccgtagcctg
atggagagcatgttctccaggggttacctcaaggttctgtgctgtactgccacactggcc
tggggagtcaacctgcctgcacacgctgtcatcatcaagggcacccaaatctacgatgct
aagcgtggtaccctggtagacctgggcatcctggatgtgatgcagatcttcgggcgtgcc
gggcggccccagttcgacaagtacggcgagggcaccatcatcacggcacatgacaagctg
agccactacctcaccctgctcacccagcagaaccccatagagagccagttcctagagacc
atggctgacaaccttaacgctgaggtatcactaggaactgtgactaacgtggaggaagca
gtgaggtggctgagttacacctacctgtacatccgcatgagagccaaccctctggcctac
gggatcaaccacaaggcctaccagatggacccaggtctggagctgtatcgtaaggaactg
gtggtgatggcagccaggaagctggacaaggccaggatgatccgcttcgaggagaggaca
ggatacttcgcctccactgacctgggcagaaccgccagtcacttctacatcaaatacaac
accatggagacgttcaatgagctgttcaactcccagaagacagaggctgacatcctcagc
atcgtctccaaggccgaggagtttgaacaggtcaaggtgcgtgatgaggagatggaggaa
ctagagcagatgctgtgtaactactgtgagctgcctgctgcaggcggagtggagaacgga
tacggcaagatcaacatcctactgcagacctacatcggccggggagaggtggacagcttc
tccctcatctcagacctgtcctacgtagcacagaacgcagctcgtatcgtcagggctctg
tttgagattgctctgaggaaacgctggcctgccatgacctaccgcctgctcaacctgtgt
aaagtgatagacaagcgtctgtggggcttcgctcaccccctgagacagttctccatcctg
cctcacaacgtgctggcccgtctggaggagaagaaactcactgtggacaaactgaaagat
atgcagaaggacgagataggtcacatgcttcaccacgtgaacatcgggttgaaggtgaag
cagtgtgtccaccagatcccttccatacttatggaggccaccatccaaccaatcacacgc
actgtgctcagggtccgcctccagatcacccccgacttccagtggcacgaccagtgtcat
ggttcagtgggagagccctggtggctgtgggtagaggaccccatcaacgatcacatctac
cattcagagtacctgctcctacagaagaaacaggtggtgagtggggagccccaacaggtg
gtattcaccatccctatctttgagcccatgccctcccagtactacatcagagctgtgtca
gaccgctggctgggctcagaggctgtctgcatcatcaacttccaacacctcatcctgcct
gaaagacatcccccacatactgagctgctggacctgcagccgttgcccatcaccgccctg
gggaacctggagtatgagagtctgtacaagttcacccacttcaatcccatccagacacag
atcttccacacgctctaccacaccgacaccaacgtcctgctgggggcgccaacgggctcc
ggtaaaaccatcgctgccgagttggccatgttccgagtcttcaaccagtaccctacctcc
aaggtggtgtacattgcccctctgaaagctctggtcagggagaggattgaggactggaag
atcaggatagaggaaaaactggggaagaaggtcgtggagctgacaggtgatgtgactcca
gacatgcgggccatcgccgcggccgacctgatcgtgaccacgccggagaagtgggacggc
gtgagtcgctcctggcagaaccgcagctacgtccagaaagtagccatcctcatcatcgac
gagatccacctgctaggggaggacagaggtcctgtgctggaggtcatagtgtccaggacc
aacttcatctcctctcacaccaacaagactgtccgcgtggtgggcctgtccacggccctg
gccaacgcacgagacctcgccgactggctagggattggacaggtgggtttgtttaacttc
cgtccctctgtgcgtcccgtcccattggaggttcacatccaaggcttcccaggacagcac
tactgcccccgcatggccagcatgaacaagcctgtgttccaagcgattcgcagtcactct
ccagccaagcctgttctgatctttgtgtcgtcgcggcgacagactcgtctgacggctcta
gacctgatagccttcctggccaccgaggacgaccctaaacagtggctgcaccaggacgag
actcagatgacagacatcatcgccacggtgagggagtccaacctgaagctgacgttggcg
tttggtatcggcatgcaccacgctggactacacgagcgagacaggaagactgtggaggaa
ctgtttgtcaactgcaagatccagatactgatagccaccagtactctggcctggggagtc
aacttccctgcccatctggtcattgtcaaaggtactgagtactacgatgggaagaccaga
cgctacgtggactaccccatcacagacgtgctgcagatgatgggccgtgcaggccgccct
cagtatgatgaccagggcaaagctgtgatcctggtccacgacatcaagaaagacttctac
aagaagttcctctacgaacccttccctgttgagtccagtctcctcggtgtcctgtcagac
catctgaatgctgagatcgctgcagggaccatcacctctaaacaggatgctatggactat
atcacctggacgtacttcttccgcaggctggtcatgaaccccagttactacagcctggat
gacatcagccacgagaccatcaacaagtacctgtccaacctggtggagaggagtctccga
gacctggagtgttcctactgtatggagataggagaggatgattgcaccattgaggccctg
acgtacggtcgtatctcctcctactactacctgaagcaccagacagtcaggatgttcaag
gagaggctgagggctgagctgcccatccaggacatcctctcggtcctcacggatgctgag
gagtacgcggagctgcccgtcaggcacaacgaggaccagctgaacagtgagctggctcag
cgtctccccctgcaggtcaacccccacagctacgacagcgcccacaccaagacccacctg
ctgctgcaggcccatttcagccgcgcacagctgccctgctccgactacggcaccgacacc
aagaccgtgctggacaacgccatacgcatctgtcaggccatgctggatgtagcagccaac
gagggctggctggtgactgctctcagcatctgtaacctggtgcagatgatcgttcagggc
aggtggctcaatgactcctctatactgaccttacctaccatagagcagcagcacctctac
ctgttcagcaggtggagctccaagggagggaagggcggcgccaggggcttccacggacca
atagaagggctccctgagctgattgccacctgcgaggggcgggagaacaccttcgctgcc
attgtgggggaggagcttcagccccatcagatctcccaggcctggtctttcctcagccat
ctgccggtggtggaggtgcgtctgagtgtgaagggttggtgggaggggtgtggggagcag
acagagcgccccctccctgcggccggggggaagctcagggatgacagaagctggctggaa
gtccacgctgaccaggagtacgtcctgcaggtctcactgcagcgcattaacaccggccag
cagaagaggaagcatgacactaaggcccaggcccccaggttccccaagagtaaggatgag
ggctggtttctggttctaggagaggtggagcgcagagagctactggccgtcaaacgcatc
ggatactgccgacaccgcagcaccgtttccctggccttctacacccccgtgaagaccgga
aagtgtatctacacgctatacttgatgagtgacagttacctgggtctggaccagcagtat
gacctccacctcaacgtgacccctgcctgcatcgctgcccaggtcaacagtgaagtcact
gaggccatgggaggcatgtccgtcaagtga
DBGET
integrated database retrieval system
