Oncorhynchus mykiss (rainbow trout): 110539186
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Entry
110539186 CDS
T07259
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110539186
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110539186
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
PYRIN
LRR_4
Motif
Other DBs
NCBI-GeneID:
110539186
NCBI-ProteinID:
XP_036795539
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All DBs
Position
12:101670409..102479291
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AA seq
1097 aa
AA seq
DB search
MSLSGGHDTKTKSPIKQERPASPVPSCVSMKSEWSMDPPLYFREGDFSTEQRPIKQERPA
SPGPSCVSMKSDKSMEQPLQFSRKVSLSKQRNQQERSESEILSGQSSQSHQTDLASIFSL
LEEKIMTFVKNELKTFKRILSPELPEGFESKKQDKEVVDAENEKQESSAREGALKITLHI
LRKMNLKELADTLEKNSDELAVICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELY
ITEGGTGEVNNEHELRQIETTTRKQARPETAIKCNDIFKPLTGQDKLIRTVLTKGVAGIG
KTVSVQKFILDWAEGKANQDVQFVFSFPFRELNLMKGDKHTFIELLNHFSMETKQSRISN
YNKYKVLFIFDGLDECRLPLDFQKNKICCDVTESTSVDVLLTNLIKGNLLSSALLWITTR
PAAANKIPSVCVDQVTEVRGFNDPQKEEYFRKRFSAEDLASRIISHVKTSRSLHIMCHIP
VFCWISATVLEHMLEHKLEEMPKTLTEMYTHLVVFHTKQKNEKYIGKEETGPHWNEESIL
SLGKLAFQQLVNGNLIFYEEDLKEAGIDVIEASVYSGLCTQLFKEECGLYQDKVYCFVHL
SIQEFLAAVYVFLNNNENLMDKPRTKDEPAVTFYKSAVDKALQSETGNLDLFLRFLLGLS
MESNQKHLRGLLTKTRSSSQSHEETVKYIKEKIRENPSPERCINLFHCLNELNDHSLVEE
IQSYLSSGSLSERNLSPGQWSALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVKASR
AALLSGCGVTEEGCASLVSALMSNPSHLRELDLSNNDLKDSGVDLLSAGLGNPHCKLETL
RLSRCLVTEEGCASLVSALRSNPSHLRELDLSYNHPGDSGVRLLSARLEDPHCRLEKLNV
EHGGEYTMKPGLRKYVCDLTLDPNTVNRLLSLSEENRKVTRRREKQPYPDHPDRFEDWYQ
VLCREGLTGRCYWEVERSGSGADIGVTYKGINRRGEDDDSRIGYNDKSWSLFCSDNRYTA
RHNNIHIDVPSSSSHRVGVYLDSPAGTLSFYRVSSDTLTHLYTFTSTFTEPLYPGFRVWY
DDSSVSLCQVVPVSNTK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctgggggacatgacaccaaaactaagagcccaatcaagcaggagagacca
gcctcccctgttcccagctgtgtgtccatgaagagtgaatggtctatggatcctcctcta
tactttagagagggagacttttctactgaacaaagaccaatcaagcaggagagaccagcc
tcccctggacccagctgtgtgtccatgaagagtgacaagtcaatggagcaacctttacaa
ttcagtagaaaagtctccctctctaaacaaagaaaccaacaggagagatcagagtcagag
attctcagtggtcagtcttcccagagtcatcaaacagacctggcctccatattcagtttg
cttgaagagaaaattatgacatttgtgaagaacgagctgaagacgttcaagaggattctt
agtccagaactcccagaaggctttgagagtaagaagcaggataaggaagtggtggacgct
gaaaatgagaagcaggagagcagtgccagagagggggctctgaagatcacactgcacatc
ctgaggaaaatgaacttgaaggagcttgctgacacactggagaaaaattcagatgagctt
gctgtgatttgccaacgtgaactcaaatctaatctaaagaagaagtttcaatgtgtattt
gaggggatcgctaaacaaggaaacccaacacttctcaataagatctacacagagctctac
atcacagagggtggaacaggagaggtcaataatgaacatgagctgagacagattgagaca
acaaccaggaaacaagcaagaccagagactgcaatcaaatgtaacgacatcttcaaaccc
ttaactggacaagacaaacttatcagaactgtgctgacaaagggagtcgctggcattgga
aaaacagtctctgtgcagaagttcatcctggactgggctgaaggaaaagcaaatcaggat
gtccaatttgtattttcattccctttccgggagctgaatttgatgaaaggggacaaacac
actttcattgaacttctcaatcacttctcaatggaaaccaaacaatcaagaatctccaac
tacaacaagtacaaagttctgttcatctttgatggtctggatgagtgccgactgccccta
gacttccagaagaacaagatctgttgtgacgtcacagagtcaacctcagtggatgttctg
ctgacaaatctcatcaagggaaatctgctttcctctgctctcctctggataactacccga
cctgcagcagccaataagatcccttcagtgtgtgttgaccaggttacagaggtacgaggg
ttcaatgacccacagaaggaggagtacttcaggaagagattcagtgctgaggacctggcc
agcagaatcatctcacacgtaaagacatcaaggagcctccacatcatgtgccacattcca
gtcttctgttggatttctgcaacagtccttgaacacatgctggaacataagttagaagag
atgcccaagactctgactgagatgtacacacaccttgttgtgtttcataccaaacagaag
aatgaaaagtatattgggaaagaagagacaggtccacactggaatgaagagagcattctg
tcactgggaaaactggcttttcaacagcttgtgaatggcaatctgattttctatgaagaa
gacctgaaagaggctggcattgatgtgattgaagcctcagtgtactcaggattgtgcaca
cagctctttaaagaggaatgtgggctgtaccaggacaaggtgtactgctttgttcatctg
agcattcaggagtttctggctgctgtatatgtgttcctcaacaacaatgagaatctaatg
gacaaaccgcgaacaaaagacgagcctgcagttactttctacaagagtgctgtggataaa
gccttacaaagtgagacaggaaacctggaccttttcctccgcttccttctgggcctctca
atggagtccaatcagaagcacttacgaggtctactgacaaagacaagaagcagctcacag
agccatgaagaaacagtcaagtacatcaaggagaagatcagggagaatccctctccagag
aggtgcatcaatctgttccactgtctgaatgaactgaatgaccattctctagtggaggag
atccaaagctacctgagctcaggaagtctctcagaacgcaacctgtcacctggacagtgg
tcagctctggtctttgtgttgctgacttcagaaaaggagctggatgtgtttgacctgaag
aaatactccagatcagaggaaggtcttttgaggctgctgccagtggtcaaagcctccaga
gctgctctgctgtcaggctgtggagtcactgaggaaggctgtgcttctctggtctcagct
ctgatgtcaaacccctcacacctgagagagttggatctgagtaacaatgacctgaaggat
tcaggagtggacctgctctctgctggactggggaatccccactgtaaactggagactctg
aggctgtcacgctgtctagtcacagaggaaggctgtgcctctctggtctcagctctgagg
tcaaacccctcacacctgagagagctggacctgagctacaatcacccaggagactcagga
gtcagactgctctctgctagactggaggatccacactgcagactggagaaactcaatgtg
gagcatggtggagagtacacaatgaaacctgggcttagaaaatatgtctgtgatctcaca
ctggacccaaacacagtaaacagactcctctctctgtctgaggagaacagaaaggtgaca
cgtaggagagagaagcagccgtatcctgatcacccagatagatttgaggactggtaccag
gtgctgtgtagagagggtctgactgggcgctgttactgggaagtagagaggagtgggagt
ggggctgatataggagtgacatataaaggaatcaacaggagaggagaggatgatgacagt
aggattggatacaatgacaagtcctggagtctgttctgctctgacaaccgttacactgcc
aggcacaataatattcacatagacgtcccctcctccagctcccacagagtaggagtgtat
ctggactcgccagccggcactctgtccttctacagagtctcctctgacacactgacccac
ctgtacacattcacctccacattcactgagcccctctatccagggtttagggtttggtat
gatgactcctcagtgtccttgtgtcaggtggtccctgtgtcaaacacaaaatga
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