Oncorhynchus mykiss (rainbow trout): 118936350
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Entry
118936350 CDS
T07259
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03271
Virion - Rotavirus
omy04145
Phagosome
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04514
Cell adhesion molecules
omy04530
Tight junction
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
omy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
118936350
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118936350
04514 Cell adhesion molecules
118936350
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118936350
09144 Cellular community - eukaryotes
04510 Focal adhesion
118936350
04530 Tight junction
118936350
09142 Cell motility
04820 Cytoskeleton in muscle cells
118936350
04810 Regulation of actin cytoskeleton
118936350
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118936350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
118936350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
118936350
04515 Cell adhesion molecules [BR:
omy04515
]
118936350
04090 CD molecules [BR:
omy04090
]
118936350
Membrane trafficking [BR:
omy04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118936350
Exosome [BR:
omy04147
]
Exosomal proteins
Proteins found in most exosomes
118936350
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin beta subunits
118936350
CD molecules [BR:
omy04090
]
Proteins
118936350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
118936350
NCBI-ProteinID:
XP_036791141
LinkDB
All DBs
Position
11:26713595..26751558
Genome browser
AA seq
768 aa
AA seq
DB search
MYVASEINHADKMDLKLLLISTLLGFICYSSAQQEGNECIKAIAKSCGECIQVGVKCGWC
MDPGFLKQGEATSTRCDELESLRKRGCSSTKVENPQGSQRPLKNKAVTNRNKGAENLRAE
DITQVQPQKITLSLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENAKNLGTQL
MLEMSKITSDFRIGFGSFVEKKLLNPCTGDQNCTSPFSYKNLLTLTRNGQEFNTLVGQQQ
IDGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTVSHYYDHPSIAHLVQKLSDNNIQTIFAVTEEFQPVYMELKNLIPKSAVGIL
SANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIMYQSSRCKNGVTGEGEMGRKCSDIS
IGDEVSFTISITAKQCPKMGKPETIKIKPLGFNEEVEITLNFICECDCHKDGIENSDICH
NGNGTYECGACRCNEGRIGRQCECSTNEVTSEDLDKRCRKDSGTDICSNNGDCVCGTCEC
KKRENPEERYSGMFCECDNFNCDRSNNKLCGGHGHCECRVCICDANWIGSACDCSLDTTT
CLASNKQICNGQGTCECGTCRCTNPKFQGPSCEICPTCPGVCAEHKECVQCRAFGTGEKK
DTCERDCSYFNLIKVKNRDKLPQPGQAFPLMHCKERDANDCWFYYTYAVNKKSEKEVHVM
ETLDCPTGSDIIPIVGWRGGGHRADRPGFASHLEAAHDHPRQERVLQV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttgcctcggaaataaatcacgccgataagatggacctgaaactacttctgatt
tcaacgttgttaggattcatttgttacagcagtgctcagcaagaagggaacgagtgcatc
aaggctattgctaaatcctgtggggagtgtattcaagtgggagtgaaatgtggctggtgc
atggacccagggttcctgaagcagggtgaggccacatcgacccgctgtgacgagctggag
tccctgaggaagagaggttgtagctccaccaaggtagagaacccccaaggcagccaacgg
cccctgaagaacaaggctgtgaccaaccgcaacaagggagcagagaatctcagagcagag
gacatcacacaggtccagccacaaaaaatcaccctcagcctcagatcgggtgaaccccag
tcttttaacctgaagttcaaacgggccgaggattaccccattgacctctactacctgatg
gacctgtcctactccatgaaggacgatctggaaaacgccaagaacctgggaacacagctc
atgctggagatgtcaaagatcacgtctgatttcagaatcggttttggttcctttgtagag
aagaagttgctgaacccctgtactggggaccagaactgcaccagtcccttcagctataag
aacctcctgacgctgaccagaaatggacaggagtttaacaccctggttggtcaacagcag
atcgatggaaacctggactcaccagagggaggcttcgatgccatcatgcaagtggctgtg
tgtggtgagcacattggctggaggaacgtcacccgtctgctggtgttctccactgacgct
ggcttccactttgctggagacgggaaactgggaggaatagttttgcccaacgatgggaaa
tgtcacctggagaacaacatgtacacagtgagccactactatgaccacccctccatcgct
cacctggttcagaaacttagcgacaacaacatccagacgatctttgccgtcacagaggag
ttccagcctgtttacatggagttaaagaatctaattcctaaatctgcagtggggatactc
tctgctaactccagcaacgttatcaacctcattattgatgcctacaattctctttcctca
gaggtgattctggagaacagcaagctaccagagggagtgaccataatgtatcagtcttca
cgctgcaagaacggagtgactggtgagggagagatgggaagaaaatgctccgatatctcc
atcggtgacgaggtgtctttcaccataagcatcacagctaagcagtgtcctaaaatgggc
aaaccagagaccatcaagatcaaacccctagggttcaatgaggaggtggagatcactctg
aacttcatctgcgagtgtgactgtcacaaagatggcattgagaacagtgacatctgccac
aacggcaacgggacttatgaatgtggagcctgcaggtgcaatgagggccgtattggtaga
cagtgtgagtgcagcaccaacgaggtgaccagcgaagacctggataagagatgccgtaaa
gacagcggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgc
aagaagagagagaacccagaggagcgctacagcgggatgttctgcgagtgtgacaacttc
aactgtgaccgctccaacaacaaactctgtggaggacatggtcactgtgagtgcagggtg
tgtatatgtgatgccaactggattggcagtgcctgtgactgttctctggacaccacgacc
tgcctggcttccaacaagcagatctgtaacggacaaggcacctgtgagtgtggcacctgc
aggtgtactaacccaaagttccagggccccagctgtgagatctgtcctacctgtccaggg
gtctgcgcagaacacaaggagtgtgttcagtgcagggcctttgggacgggggagaagaag
gacacgtgtgagagagactgtagctacttcaacctgatcaaggtgaagaacagggacaag
ctgcctcagccaggacaggccttccccctgatgcactgtaaggagagggacgccaacgac
tgctggttctactacacctacgctgtcaacaaaaagtcagagaaggaggtccatgtgatg
gaaacactagactgccctacgggctctgacatcatccccattgtgggctggcgtggtggc
gggcatcgtgctgatcggcctggctttgcttctcatctggaagctgctcatgatcatcca
cgacaggagagagttctccaagtttga
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