KEGG   Oncorhynchus mykiss (rainbow trout): 118936350
Entry
118936350         CDS       T07259                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03271  Virion - Rotavirus
omy04145  Phagosome
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04514  Cell adhesion molecules
omy04530  Tight junction
omy04810  Regulation of actin cytoskeleton
omy04820  Cytoskeleton in muscle cells
omy05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    118936350
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118936350
   04514 Cell adhesion molecules
    118936350
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118936350
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118936350
   04530 Tight junction
    118936350
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118936350
   04810 Regulation of actin cytoskeleton
    118936350
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    118936350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    118936350
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    118936350
   04515 Cell adhesion molecules [BR:omy04515]
    118936350
   04090 CD molecules [BR:omy04090]
    118936350
Membrane trafficking [BR:omy04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    118936350
Exosome [BR:omy04147]
 Exosomal proteins
  Proteins found in most exosomes
   118936350
Cell adhesion molecules [BR:omy04515]
 Integrins
  Integrin beta subunits
   118936350
CD molecules [BR:omy04090]
 Proteins
  118936350
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 118936350
NCBI-ProteinID: XP_036791141
LinkDB
Position
11:26713595..26751558
AA seq 768 aa
MYVASEINHADKMDLKLLLISTLLGFICYSSAQQEGNECIKAIAKSCGECIQVGVKCGWC
MDPGFLKQGEATSTRCDELESLRKRGCSSTKVENPQGSQRPLKNKAVTNRNKGAENLRAE
DITQVQPQKITLSLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENAKNLGTQL
MLEMSKITSDFRIGFGSFVEKKLLNPCTGDQNCTSPFSYKNLLTLTRNGQEFNTLVGQQQ
IDGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTVSHYYDHPSIAHLVQKLSDNNIQTIFAVTEEFQPVYMELKNLIPKSAVGIL
SANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIMYQSSRCKNGVTGEGEMGRKCSDIS
IGDEVSFTISITAKQCPKMGKPETIKIKPLGFNEEVEITLNFICECDCHKDGIENSDICH
NGNGTYECGACRCNEGRIGRQCECSTNEVTSEDLDKRCRKDSGTDICSNNGDCVCGTCEC
KKRENPEERYSGMFCECDNFNCDRSNNKLCGGHGHCECRVCICDANWIGSACDCSLDTTT
CLASNKQICNGQGTCECGTCRCTNPKFQGPSCEICPTCPGVCAEHKECVQCRAFGTGEKK
DTCERDCSYFNLIKVKNRDKLPQPGQAFPLMHCKERDANDCWFYYTYAVNKKSEKEVHVM
ETLDCPTGSDIIPIVGWRGGGHRADRPGFASHLEAAHDHPRQERVLQV
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgtatgttgcctcggaaataaatcacgccgataagatggacctgaaactacttctgatt
tcaacgttgttaggattcatttgttacagcagtgctcagcaagaagggaacgagtgcatc
aaggctattgctaaatcctgtggggagtgtattcaagtgggagtgaaatgtggctggtgc
atggacccagggttcctgaagcagggtgaggccacatcgacccgctgtgacgagctggag
tccctgaggaagagaggttgtagctccaccaaggtagagaacccccaaggcagccaacgg
cccctgaagaacaaggctgtgaccaaccgcaacaagggagcagagaatctcagagcagag
gacatcacacaggtccagccacaaaaaatcaccctcagcctcagatcgggtgaaccccag
tcttttaacctgaagttcaaacgggccgaggattaccccattgacctctactacctgatg
gacctgtcctactccatgaaggacgatctggaaaacgccaagaacctgggaacacagctc
atgctggagatgtcaaagatcacgtctgatttcagaatcggttttggttcctttgtagag
aagaagttgctgaacccctgtactggggaccagaactgcaccagtcccttcagctataag
aacctcctgacgctgaccagaaatggacaggagtttaacaccctggttggtcaacagcag
atcgatggaaacctggactcaccagagggaggcttcgatgccatcatgcaagtggctgtg
tgtggtgagcacattggctggaggaacgtcacccgtctgctggtgttctccactgacgct
ggcttccactttgctggagacgggaaactgggaggaatagttttgcccaacgatgggaaa
tgtcacctggagaacaacatgtacacagtgagccactactatgaccacccctccatcgct
cacctggttcagaaacttagcgacaacaacatccagacgatctttgccgtcacagaggag
ttccagcctgtttacatggagttaaagaatctaattcctaaatctgcagtggggatactc
tctgctaactccagcaacgttatcaacctcattattgatgcctacaattctctttcctca
gaggtgattctggagaacagcaagctaccagagggagtgaccataatgtatcagtcttca
cgctgcaagaacggagtgactggtgagggagagatgggaagaaaatgctccgatatctcc
atcggtgacgaggtgtctttcaccataagcatcacagctaagcagtgtcctaaaatgggc
aaaccagagaccatcaagatcaaacccctagggttcaatgaggaggtggagatcactctg
aacttcatctgcgagtgtgactgtcacaaagatggcattgagaacagtgacatctgccac
aacggcaacgggacttatgaatgtggagcctgcaggtgcaatgagggccgtattggtaga
cagtgtgagtgcagcaccaacgaggtgaccagcgaagacctggataagagatgccgtaaa
gacagcggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgc
aagaagagagagaacccagaggagcgctacagcgggatgttctgcgagtgtgacaacttc
aactgtgaccgctccaacaacaaactctgtggaggacatggtcactgtgagtgcagggtg
tgtatatgtgatgccaactggattggcagtgcctgtgactgttctctggacaccacgacc
tgcctggcttccaacaagcagatctgtaacggacaaggcacctgtgagtgtggcacctgc
aggtgtactaacccaaagttccagggccccagctgtgagatctgtcctacctgtccaggg
gtctgcgcagaacacaaggagtgtgttcagtgcagggcctttgggacgggggagaagaag
gacacgtgtgagagagactgtagctacttcaacctgatcaaggtgaagaacagggacaag
ctgcctcagccaggacaggccttccccctgatgcactgtaaggagagggacgccaacgac
tgctggttctactacacctacgctgtcaacaaaaagtcagagaaggaggtccatgtgatg
gaaacactagactgccctacgggctctgacatcatccccattgtgggctggcgtggtggc
gggcatcgtgctgatcggcctggctttgcttctcatctggaagctgctcatgatcatcca
cgacaggagagagttctccaagtttga

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