Oncorhynchus mykiss (rainbow trout): 118936531
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Entry
118936531 CDS
T07259
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
118936531
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118936531
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
PYRIN
LRR_4
Motif
Other DBs
NCBI-GeneID:
118936531
NCBI-ProteinID:
XP_036798371
LinkDB
All DBs
Position
13:66324737..66478612
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AA seq
1086 aa
AA seq
DB search
MSLSGERDEGDPASKMSLSGEREEGDPASKMRLSGEREGGPDTKAKRPIKQERPASPVPS
CVSMKSDKSMDLPIFFREGDFSTEQRNQQERSESEILSGQSSQSHLTDLASIFSMLEEKI
LTFVKNELKMFKRILSPELPEGFESQKQDKEVVDAEDEKQESNAREGALKITLHVLRKMN
QKELADTLEKYELAEICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTG
EVNNEHELRQIETTTRKQARPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIGKTVSVQK
FILDWAEGKANQDVQFVFSFPFRELNLMKKDKHTFIELLNHFSMETKQSIISNYNKYKVL
FIFDGLDECRLPLDFQKNKICWDVTESTSVDVLLTNLIKGNLLPSALIWITTRPAAANKI
PSGCVDQVTEVRGFNDPQKEEYFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVFCWISA
TVLEHMLKHKREEMPKTLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNEESILSLGKLAF
QQLVKGNLIFYEEDLKEAGIDVNEASVYSGLCTQIFKEECGLYQDKVYCFVHLSIQEFLA
AVYVFLSFINNNENLMDKLQTNDKPEVTFYKSAVDKALQSETGNLDLFLRFLLGLSLESN
QKHLRGLLTKTRSSSQSHEETVKYIKEKIRENPSQERSINLFHCLNELNDHSLVEEIQRY
LRSGSLSKPNLSPAQWSALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVKASRAALL
SGCGVTEEGCASLVSALRSNPSHLRELDLSNNDLQDSGVKLLSDGLGNPHCKLETLRLSG
CLVTEEGCASLVSALRSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGG
ENRMKPGLRKYVCDLTLDLNTVNRRLSLSEGNRKVTWGAEKQPYPDHPERFEDCRQVLCR
EGLTGRCYWEVERSGRRADIGVTYKGISRRGGLNDCCFGYNDKSWSLFCYDNSYTARHNN
NSTTIDVPSSSSHRVGVYLDWSAGTLSFYRASSDTLTHLITFTSTFTEPLYPGFWVHVDS
SVSLCQ
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggggagagagatgagggggaccctgcctctaaaatgagtctctctggg
gagagagaggagggggaccctgcctcaaaaatgagactatctggggagagagagggagga
cctgacaccaaagctaagagaccaatcaagcaggagagaccagcctcccctgttcccagc
tgtgtgtccatgaagagtgacaagtctatggatctacctatattctttagagagggagac
ttttctactgaacaaagaaaccaacaggagagatcagagtcagagattctcagtggtcag
tcttcccagagtcatctaacagacctggcctccatattcagtatgcttgaagagaaaatt
ctgacatttgtgaagaacgagctgaagatgttcaagaggattcttagtccagaactccca
gaaggctttgagagtcagaagcaggataaggaagtggtggacgctgaagatgagaagcag
gagagcaatgccagagagggggctctgaagatcacactgcacgtcctgaggaaaatgaac
cagaaggagcttgctgacacactggagaaatatgagctcgctgagatttgccaacgtgaa
ctcaaatctaatctaaagaagaagtttcaatgtgtatttgaggggatcgctaaacaagga
aacccaacacttctcaataagatctacacagagctctacatcacagagggtggaacagga
gaggtcaataatgaacatgagctgagacagattgagacaacaaccaggaaacaagcaaga
ccagagactgcaatcaaatgtaacgacatcttcaaacccttaactggacaagacaaacct
atcagaactgtgctgacaaagggagtcgctggcattggaaaaacagtctctgtgcagaag
ttcattctggactgggctgaaggaaaagcaaatcaggatgtccaatttgtattttcattc
ccttttcgggagctgaatttgatgaaaaaggacaaacacactttcattgaacttcttaat
cacttctcaatggaaaccaaacaatcaataatctccaactacaacaagtacaaagttctg
ttcatctttgatggtctggatgagtgccgactgcccctagacttccagaagaacaagatc
tgttgggacgtcacagagtcaacctcagtggatgttctgctgacaaatctcatcaaggga
aatctccttccctctgctctcatttggataactacccgacctgcagcagccaataagatc
ccttcagggtgtgttgaccaggtgacagaggtacgagggttcaatgacccacagaaggag
gagtacttcaggaagagattcagtgatgaggacctggccagcagaatcatctcacacata
aagacatcaaggagcctccacatcatgtgccacattccagtcttctgttggatttctgca
acagtccttgaacacatgctgaaacataagagagaagagatgcccaagactctgactgag
atgtacacacaccttgtggtgtttcataccaaacagaagaatgaaaagtatcttgggaaa
gaagagacaggtccacactggaatgaagagagcattctgtcactgggaaaactggctttt
caacagcttgtgaagggcaatctgattttctatgaagaagacctgaaagaggctggcatt
gatgtcaatgaagcctcagtgtactcaggattgtgcacacagatctttaaagaggaatgt
gggctgtaccaggacaaggtgtactgctttgttcatctgagcattcaggagtttctggct
gctgtatatgtgttcctctcattcatcaacaacaatgagaatctaatggacaaactgcaa
acaaacgacaagcctgaagttactttctacaagagtgctgtggataaagccttacaaagt
gagacaggaaacctggaccttttcctccgcttccttctgggcctctcactggagtccaat
cagaagcacttacgaggtctactgacaaagacaagaagcagctcacagagccatgaagaa
acagtcaagtacatcaaggagaagatcagggagaatccctctcaagagaggagcatcaat
ctgttccactgtctgaatgaactgaatgaccattctctagtggaggagatccaaagatac
ctgagatcaggaagtctctcaaaacccaacctgtcacctgcacagtggtcagctctggtc
tttgtgttgctgacttcagaaaaggagctggatgtgtttgacctgaagaaatactccaga
tcagaggaaggtcttctgaggctgctgccagtggtcaaagcctccagagctgctctgctg
tcaggctgtggagtcacagaggaaggctgtgcttctctggtctcagctctgaggtcaaac
ccctcacacctgagagagctggatctgagtaacaatgacctgcaggattcaggagtgaag
ctgctctctgatggactggggaatccccactgtaaactggagactctgaggctgtcaggc
tgtctagtcacagaggaaggctgtgcttctctggtctcagctctgaggtcaaacccctca
cacctgagagagctggacctgagctacaatcacccaggagactcaggagtcagactgctc
tctgctggactggaggatccacactgcagactggagaaactcaatgtggaacatggtgga
gagaacagaatgaaacctggacttagaaaatatgtctgtgatctcacactggacctaaac
acagtaaacagacgcctctctctgtctgaggggaacagaaaggtgacatggggggcagag
aagcagccgtatcctgatcacccagagagatttgaggactgtagacaggtgctgtgtaga
gagggtctgactgggcgctgttactgggaggtagagaggagtgggagaagggctgatata
ggagtgacatataaaggaatcagcaggagaggagggcttaatgactgttgttttggatac
aatgacaagtcctggagtctgttctgctatgacaacagttacactgccaggcacaataat
aactccactaccatagacgtcccctcctccagctcccacagagtaggagtgtatctggac
tggtcagctggaactctgtccttctatagagcctcctctgacacactgacccacctgatc
acattcacctccacattcactgagcccctctatccagggttttgggttcatgttgactcc
tcagtgtccctctgtcagtga
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