Oncorhynchus mykiss (rainbow trout): 118936547
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Entry
118936547 CDS
T07259
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like isoform X1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250
Viral life cycle - HIV-1
omy04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118936547
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118936547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
118936547
03110 Chaperones and folding catalysts [BR:
omy03110
]
118936547
Enzymes [BR:
omy01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
118936547
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118936547
Chaperones and folding catalysts [BR:
omy03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
118936547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
WW
EB
WW_TCERG1
Rotamase_2
DUF8180
DUF7496
Motif
Other DBs
NCBI-GeneID:
118936547
NCBI-ProteinID:
XP_036804362
LinkDB
All DBs
Position
17:253254..266032
Genome browser
AA seq
216 aa
AA seq
DB search
MADAEDEKLPSGWEKRMSRSSSRVYYFNHITNASQWERPVGSGDGSGEPDKVRCSHLLVK
HSQSRRPSSWREENITRSKEEALDLIQKYIEQMQSGEEEFEALASQFSDCSSARNGGDLG
LFGRGQKLFEDLSFALKVGDISCDRGVCVCVSGQKLFEDLSFALKVGDISCDRGVCVCVS
GQMQKPFEDASFALKVGDMSGPVFTDSGVHVILRTG
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgccgaggacgagaagctaccgtccggatgggaaaagcggatgagccgcagt
tccagtagagtgtactactttaaccacatcaccaatgccagccagtgggagcgtccggtg
gggtcaggtgatgggagtggcgagccagacaaggtgcgttgttcccacctcctggtgaag
cacagccaatcgcgtcgcccgtcctcctggagggaggagaacatcacgcgctccaaagag
gaggccctcgacctcatacaaaagtacatagagcagatgcagtcaggagaggaggagttt
gaggctttggcctctcagttcagtgactgcagctccgcacgcaacggaggagacctggga
ctgttcggcagaggtcagaagctgtttgaggacctgtccttcgctctgaaggtgggagac
attagttgtgatagaggtgtgtgtgtgtgtgtttcaggtcagaagctgtttgaggacctg
tccttcgctctgaaggtgggagacattagttgtgatagaggtgtgtgtgtgtgtgtttca
ggtcagatgcagaagccgtttgaggatgcgtccttcgctctgaaggtgggagacatgagt
ggtccggtgttcaccgattctggagttcacgtcatccttcgcacgggatag
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