Oncorhynchus mykiss (rainbow trout): 118936668
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Entry
118936668 CDS
T07259
Name
(RefSeq) low-density lipoprotein receptor-related protein 3-like isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
118936668
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118936668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
118936668
NCBI-ProteinID:
XP_036837567
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All DBs
Position
6:complement(96418516..96497895)
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AA seq
856 aa
AA seq
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MMDRIGAPGLLLVIWILIRFASVCVASCSGKVELHTERRGVIYSPSWPLNYPPGMNCSWN
IEGDRGEVITISFPNFDLEESGQCQGDWLLLGPTWREEYRVCGSLLPPPFISSRGRVWLY
FHSQANSSGLAQGFRLSYIRGRLGQSSCQSDEFLCGNGKCLPRTWRCNGLDECGDATDER
SCAPPPTPPRTSLCPPGTAPCTQAQSTRCLPPSLRCNGARDCPDGSDEAGCPDTACGKRL
GNFYGTFASPDFFRPNRSAVGELRCSWLLDTQDPKPIVLQLDLGLGPGDSLHVYDGLVQR
AERLLQALSHHNNRRPALLESSRGQMSLQYLAQPLSPGHGFNATYQVKGYCFPGEHPCGL
DQGCYSERQRCDGYWHCPTGRDEEECPVCQEGEYPCEGGSGACYPASERCNNQKKCPDGS
DEKNCFDCQPGNFHCGTNLCIFETWHCDGQEDCLDGSDERDCLGAVPRKECLYCFKVITA
ALIGSLVCGLLLVIALGCAFKLYSLRTREYRAFETQMTRLEAEFVQREAPPSYGQLIAQG
LIPPVEDFPVYNPTQASMLQNIRTAMRRQIRRHSSRRATSHRRLGRLWNRLFHRGTRLRG
QIPLLTPPGSQVALGLHSYHTSEGPGARAGDGGGGAGMVGGMAGMRPARTPSRCSTAVGF
ALHAHTQALSQSQSPHPSLESPHSPPSPSDSEPSEGSPCSPESPGSRVRLPLSELSTPGQ
QSDSLTSAPGILSQQCPLEGSTGHYTRRASRKLVLGLAANLRGVALRHYSPMGLTSPVTP
PPVLPPPDSQPPCQTSSPSGSSDDSQRFHDLEVPTRERRRRRRGIGVPSGLNTSSSEEEE
EEEEEEEDGDETLLIC
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcggattggagcgccggggcttctcctggtcatatggatattaatacggttc
gcttcggtctgtgtcgcatcatgcagtggcaaggttgagcttcatacagagagaagaggt
gtaatctacagcccctcctggcccctcaactacccccccggaatgaactgttcctggaac
atagagggggacaggggagaggttatcaccatcagcttccctaactttgacctggaggag
tcaggtcagtgtcagggggactggctgctcctaggccccacctggagagaggagtaccgg
gtgtgtggctccctcctcccacctcccttcatctcctccaggggaagagtctggctctac
ttccactcacaggccaacagctcaggactggctcaggggttcagactgtcttatatcaga
ggtcgcctgggccagtccagctgtcagagtgatgagttcctgtgtggtaacggtaaatgt
cttccccgaacgtggcgctgtaacggcctggatgagtgcggcgacgctaccgacgaacgg
agctgtgcccctcctccgacccctccccgcacctccctctgcccccccggcaccgccccg
tgtacccaggcccagtccactcgctgcctgcccccctcgctgcgctgcaacggagcccgg
gactgccccgacggctcggacgaggcagggtgccccgacacggcctgcggcaaacgcctg
gggaacttctacggaacattcgcctccccggacttcttccgtcccaaccgcagcgctgtg
ggggagctgaggtgctcctggctactggacactcaggaccctaagcctatcgtgttgcag
ctggacctggggttagggccaggggactccctccatgtctatgatgggctggtccagaga
gcagagcgcctcctgcaggccctgtcgcatcataacaacaggagaccagccctgttagaa
tccagtagaggacagatgagtctacagtacctggcccaaccactcagccctgggcatggg
ttcaacgctacataccaggtgaaaggttactgtttccctggggaacacccgtgtggattg
gaccagggctgttattctgaacgccagcgctgtgacgggtactggcactgccctacgggg
cgcgacgaggaggagtgtccagtttgccaggaaggggagtacccctgtgaggggggcagt
ggggcctgctaccctgcctctgaaagatgtaacaaccagaagaagtgcccagacggttct
gatgagaagaactgttttgactgccagccgggtaacttccactgtggcaccaacctgtgt
atcttcgagacgtggcactgtgatggccaggaggactgtctggatggtagtgacgagaga
gactgtttgggagctgtacccaggaaggaatgtctgtattgtttcaaggtgatcactgct
gccctgattggttctctggtctgtggcctcctccttgtcatcgctctgggctgtgccttc
aaactctactccctccggacaagagagtacagagcatttgagacccagatgacccgtctg
gaggcggagtttgttcagagagaggctccgccctcctatggtcagctgatcgcccagggc
ctcatccctccggtggaggacttccctgtgtacaaccccactcaggcctccatgctccag
aacatccgtacagcgatgcggaggcagatcagaagacactcctcccgccgggccacgtca
caccgccgcctggggcgcctctggaaccgtctgttccaccgagggacccgtctccgcggc
cagatcccactcctcacaccccccgggtctcaggtggctctgggcctgcactcctaccac
acctcggagggacctggagccagggctggggatggaggtggcggggcgggcatggtggga
ggcatggcgggcatgagaccagcaaggaccccctcccgctgctctacagcagtaggcttc
gccctgcatgcccacacccaggccctgtcacagtcccagtccccccacccctccttggag
tctccccactccccaccctccccctctgacagtgaaccatccgagggatctccttgttcc
ccagagagccccggtagcagggttaggttgcccctcagcgagctctccacccctgggcag
cagagtgactcattaacgtctgcccccggcatactgagccagcagtgccccctagagggc
agcacaggtcattacactcgccgggcctccaggaagctggtcttggggctggctgccaac
ctgagaggggtggctctacgacactactcccccatggggctcacctcccccgttaccccc
ccccctgtccttccccctccagactcccagccgccctgccagacgtcatccccctcgggg
tcttcagacgacagtcagaggttccatgacctggaagtgccaacccgggagaggaggagg
aggaggaggggtataggggtgcctagtggactgaacaccagcagcagtgaggaagaggag
gaggaggaggaggaggaggaggatggagatgagactctactgatctgctag
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