KEGG   Oncorhynchus mykiss (rainbow trout): 118936687
Entry
118936687         CDS       T07259                                 
Name
(RefSeq) protein transport protein Sec31A-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118936687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    118936687
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:omy02044]
    118936687
Membrane trafficking [BR:omy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    118936687
Secretion system [BR:omy02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   118936687
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40 Beta-prop_TEP1_2nd WDR55 TPR_Sec16 Beta-prop_EML Beta-prop_EIPR1 EIF3I Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Beta-prop_HPS5 MIOS_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Prp18
Other DBs
NCBI-GeneID: 118936687
NCBI-ProteinID: XP_036844206
LinkDB
Position
1:89820375..89845196
AA seq 1289 aa
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTTAALEIFQVDFADPSLGMKLK
GSLPTSNRLHSLVWVNFGEGEDGLGGRLIGGSDNGTVTVYSPEAIVTSGAEAIIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQLCEPPEDISVVSWNR
QVQHILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRM
PVIQMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYE
LPTTNQWCFDIQWCPRNPALLSAASFDGWISVYSVMGGSLEAQQQSRADQSLCGAFPQIS
SSFDTMDPFGTGQVLPPLQVPQPTPQTTLVAPLKKPPKWVRRPVGASFAFGGKLITFESP
KAPVQSPQPVPVPRQVFVSQVTTETELLQRSRELQAALQSGSLSDYCQAKIHKAPTDSEQ
DIWRFLLVNFEDEARVKFLRLLGFSKEDLERKISTCLGKNLQPNGHGVDANDLAEKIQLL
STQRSEESGDEVDCTKTPGSSSPSDFFSQIPPQPQDKEKKISFPIPVSADADGLISQALL
VGNFEGAVDLCLNEGRYAEAILLAISGGQELLQKTQQTYLEKQRNSISMLISSVVTQNWG
DIVQSCALDNWKEALAALLTYAHPKEFAHLCETLGSRLEGERTEKRCLQACLCYICSGNI
EKLVECWALQRDCSSPLVLEDLVEKMMVLRKSVERLRNSEVAVQSPVLADKLTHYAGLLA
SQGSLATALSYLPDTSDQACIMMMRDRLFHAQGEGGAAGGQQPPPCPYNRVRVTGGDPAP
AQAPAVPVQAQPPTQTPGPYQPPLPVMSVGGQPPPPVMSVGGQPPMTTVFTPQAAALSRG
PPPPSYGGLPPSSPAPPPSGLPRTGLRPAYPQHPATAPGFSPLQPFQPQQQPMSAGLGGP
GLSAFPTGPAMPGSSLSGHPLPPFSAPGGLPTMPSPGPPPSGFTPTSLPSGPMPLSYQQP
GAPVGMYPPGGSHLHSQGPPAGPPSGPYPPLGPGYPQGGPGAPAVKSFSAPSVAPPPTGY
FPWLSTPLVDDDEGQDGWNDPPAVRGGSRKKKVVPDNYTPPAPITAPVMGGFPMEGHHHQ
PQGQQGHDPSRTQQFPPGAPQEPSVQLLQALPAERVEQREIPAEHMVLKQTFDSLVQRCQ
LAAQDPQTKRKLDDASKRLGYLYDKLREHSLSNNILGGLHEISRCVAGQNYQRGLEVHTA
VVTSSNFSEIQAFMPILKVVMTIANKLGV
NT seq 3870 nt   +upstreamnt  +downstreamnt
atgaggctgaaagagatccagaggaccgctcatccagcatggagccctgccccccaccac
cctatctgcctggctttaggcacgtcagctcagcagctggatgcgtcattcaacaccact
gccgccttggaaatattccaggtggattttgccgatccttccctgggcatgaagctcaag
gggtccctacctacttctaacaggctccatagtctggtgtgggtgaactttggagaagga
gaagacggtttgggagggagactgattggaggcagtgataatggcacggtaacggtgtat
agcccagaagccatcgtaacatcaggggcagaggcaataataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttcagagtaatctgttggcgtcaggt
gcaaacgattcagagatctacatctgggatttgaacaatttcagcaatccaatgacaccc
gggacaaagtcacagctttgtgagcctcctgaagatatcagtgtagtgtcgtggaacaga
caggtgcaacacatcctggcctctgcgaaccccagtgggaaagcagtggtctgggacctg
aggaagaacgagcccatcatcaagattagtgaccacagcaaccggatgcactgttcaggg
atgctctggcaccccgaggtggccacccagttggtcctggcctcagaagatgaccgcatg
ccagtcattcagatgtgggacctgcgctttgccacgtcccctctcaaagtcctggagaac
cacacaaggggacttctgtccatagcgtggagccaagcagacccggagctgttgctcagt
agtgctaaagacaacaggatcctctgctggaacccaaacactggagaggtgatctatgag
ttaccaacgaccaatcagtggtgctttgacatccagtggtgtcccaggaacccagcgctg
ctgtcggccgcctcgtttgacggctggatcagtgtttacagcgtgatgggaggaagcctg
gaggcccagcagcagagcagggctgatcagtctttgtgtggtgctttcccacagatctcc
tcgtcctttgacaccatggatccgtttgggacaggccaggtgctgccccctctgcaagtt
ccccaacccacccctcagaccaccctcgtcgctccgctgaagaagccccccaagtgggtt
cgtaggcccgtaggagcctcattcgcttttggtgggaagctgatcacctttgagagtcct
aaggctccagtccagagcccacagcccgtccctgtccccaggcaggtgtttgtgagccag
gtcaccacggaaacagagctcctccaacgttccagagagctgcaggctgctctgcaatct
ggatccttgtcagactactgccaggccaagatccacaaggcccccacagactctgaacag
gatatatggaggtttctcctggtcaactttgaagatgaagcccgggtcaaattcctgaga
cttttgggtttcagcaaagaggatttagagagaaagatatccacctgtttggggaagaac
ctgcagcctaacggacacggagtggatgccaacgatctggctgagaagatacagcttctc
tctactcagaggtcagaagaatccggggatgaggttgactgcaccaagactccgggttca
tcctcgccctctgactttttcagtcagatcccaccacaaccacaagacaaggagaagaag
atcagcttcccgatccctgtctcagcagatgcagatggtctgatcagccaggctctgctg
gtgggaaactttgagggagcggtggacctgtgtctgaacgaggggcgctacgctgaggcc
atcctactggcgatcagtggaggacaggagctactgcagaagacccagcagacatacctg
gagaagcagaggaacagcatctctatgctgatctcatccgtggtgacccagaactgggga
gacatcgtgcagagctgtgccttggataactggaaggaggctctcgctgcactcctaacc
tacgctcaccccaaagagtttgctcatctgtgtgagaccctggggtcgcgtctggagggg
gagaggacagagaaacgctgtctgcaggcatgtctctgttacatttgctctgggaacatt
gagaaactagtggaatgctgggccctgcagagggactgctcatctcccctggttttagag
gacttggtagagaagatgatggttctgcgtaagtctgtggagcgtctgaggaacagcgag
gtggctgtacagagtcctgtcctggctgacaagctgactcactacgctggtctcctagct
tcacaaggcagcctggctacagccctgtcctacctgccagacacctcagaccaggcttgc
atcatgatgatgagagaccggctgttccacgcccagggagagggaggagctgcagggggg
caacagcccccaccgtgcccttacaacagagtcagggtgactgggggcgaccctgcccct
gctcaggcccctgctgtccccgtccaagcacaaccaccaacacagacaccggggccctac
cagcctcctcttcctgtgatgtcagtgggtggccagcctcctcctcctgtgatgtcagtg
ggtggccagcctcctatgacgacagtcttcactcctcaagctgctgctctctccagaggg
ccgcctcctccttcgtatggcggtctgccaccctcctcccctgctcctccaccgagtggg
ctgccacgtacaggactacggccagcctaccctcaacatcctgccactgccccagggttc
tctccactccagccattccagccacaacagcagcccatgtctgcaggactaggtggcccc
ggcctctctgccttccctacaggacctgctatgccaggctccagcctatctggacacccc
ctgcctccgttctctgcccctggcggcctccccaccatgcccagcccagggccacctccg
tcaggcttcacccccacctcgctcccttcaggccccatgccactcagctaccagcagcct
ggggcccccgtcggcatgtacccaccaggggggtctcaccttcacagccaaggcccacct
gcaggtcccccctctggtccgtacccacccctgggacctgggtacccacaaggaggtcct
ggagccccggccgtcaagtccttctctgctccgtcggttgctcctcctcctacagggtac
ttcccttggctgagtactccccttgttgacgatgatgaaggacaagatggctggaacgac
ccaccagcagtacgagggggttctaggaagaaaaaggttgtcccagacaactacacccct
ccggctcccatcaccgcccctgttatggggggtttccccatggagggccatcatcatcag
ccccaaggacagcagggccacgaccccagccgcacgcagcagttccccccaggggcccct
caggagcccagcgtacagctcctccaggcgctgccggctgagagggtggagcagagagag
atccctgcagagcacatggtcctcaagcagaccttcgacagcctggttcaacgctgccag
ctagccgcacaagacccacaaacaaagaggaaacttgacgatgcatcgaaacgccttggg
tacctgtatgacaagctgagagagcattcgctgtctaacaacatcctggggggtttacat
gagatcagccgctgcgtggcgggccagaactaccagcgtggcctggaggtccacactgct
gtggtcaccagcagcaacttcagcgagatccaagccttcatgcccatcctcaaagtggtc
atgaccatcgccaacaagctgggcgtctga

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