Oncorhynchus mykiss (rainbow trout): 118936764
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Entry
118936764 CDS
T07259
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIML2 isoform X1
KO
K12015
tripartite motif-containing protein 39 / bloodthirsty-related gene family protein [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
118936764
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118936764
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118936764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
NOMO1-like_1st
U-box
Baculo_IE-1
zf-rbx1
IDO
zf-RING_11
DUF3958
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
118936764
NCBI-ProteinID:
XP_036789866
LinkDB
All DBs
Position
10:complement(74093187..74108411)
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AA seq
686 aa
AA seq
DB search
MALSGSGGFLSEDQFICSICLDVFTNPVSTPCGHSYCLDCISTYWDGGGGKTCVCPLCKE
SFRKRPELHINRTLKEITEQFKKMADGLDRGAMVFEGGIESQGLGGGGNEGVSYGVERPP
VPPRPPGMGVMPGDLLLEMKTRFQRPSNSRTPPPVLHPHPPSPFSSNTTALSPPAPPVVP
RRYTLSGPADSSTDAPLCPEHQRGLEFFCRTDQTCGCAVCMEGEHHGHQVIPAKREWLIK
KSQLEITEAELRDMITQREKKVEDIRTSLENIQVCAEHETAGSMHMFSALVSSVERSQAE
LLEVIEMSQRAAQHQGQTLIRDLEQEISELRKRSATLTQLAQSDDYVLFFKTFSTPPQTR
DWSDAVVTSDLTSGAVLLTVNQMVERFREELKRLPEICLRPQPQTDQSVGRNIPRLRPQP
QPDQSVGRCSPSLLSQPNYAVGRNSPNLPSQPDQSLGRSSPSLRSPPPPEHSVGSPDWLS
HPQPEQSVGRNPKPKVRRVQEYAVDITLDPLTAHPRLLISDDGKQVRCWDRYQPVADGPE
RFDRVVCVLGRQAFSSGRHYWEVEVGGKTDWDLGVASHSINRKGKITVSPAHGYWFLSLR
DKNDYAFRTEPSTALGLNHKPNRIGIYVDCDKGQVSFYNVDAKMLIYTFTDSFSDVIHPF
FSPCTNKSGRNEAPLIICPVSMPLVD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctctctccgggtcgggtggcttcctctctgaggatcagttcatctgttctatctgc
ctggatgtgttcaccaacccagtctccacaccctgtggtcacagctactgtctggactgc
atctccacctactgggatggaggaggagggaagacgtgtgtgtgcccgctgtgtaaggag
agcttcaggaagaggccggaacttcacatcaaccgcaccctgaaggagatcaccgagcag
tttaagaagatggcagacggattggaccggggggccatggtgtttgaaggagggattgag
agtcaaggtttgggtggcggtggaaatgagggggtgtcatacggcgttgagcgtcctccg
gtccctccaagacccccagggatgggtgtgatgcctggggatttgttgttggagatgaag
accaggttccaacgaccttcgaactccagaacccctccgccggtcctccacccccacccg
ccctcacccttctcctccaacaccaccgccctctcgccccccgcccctcctgttgtccca
cgcagatacaccctgagcgggccggctgattcctccaccgatgcgcctctctgtcctgaa
caccagagggggctggagttcttctgccggacagaccagacgtgtgggtgtgccgtgtgc
atggagggagagcaccatggacaccaggttataccagccaagagagagtggctcattaag
aagtctcaattggaaatcacagaggcagagctgagggacatgatcacacagagagaaaag
aaggtggaggacatcaggacatcactggagaacatacaagtgtgtgcggagcatgagaca
gcaggcagcatgcatatgttctctgccctggtgagctctgtggagaggagccaggcagag
ttgttggaggtgatagagatgtcacagcgggctgcacagcaccaaggacagaccctcatc
agagacctagagcaggagatctctgagctgaggaagagaagcgctaccctcacccagcta
gcccagtctgacgactacgtacttttcttcaagacattctccacgccgcctcagaccagg
gattggtcggatgctgttgtgacctctgacctcacctcaggggcggtgcttctgactgtc
aatcaaatggtggagcggtttcgggaggagctcaagagactgccggagatctgtctgcgt
cctcaacctcaaacagaccaatctgtggggagaaatattccaaggttgcgtcctcaacct
caaccagaccaatctgtgggaagatgcagtccaagtttgctttctcaaccaaactatgct
gtcggaagaaatagtccaaatttaccttctcaaccagaccagtccctgggaagaagtagt
ccaagtttgcgttctccacctccaccagaacactctgtaggaagtccagattggctttca
caccctcaaccagagcagtcagtgggaagaaatccaaaaccaaaggtgaggagagtgcag
gaatatgcagtggacataaccctggaccccctcaccgcccacccacgcctgctcatctcc
gacgacggcaagcaggtgcgctgctgggaccgctaccagcccgtggcggacggccccgag
cgctttgaccgtgtggtctgcgtcctcgggcgccaggccttctcttcgggacgccattac
tgggaggtggaggtgggtgggaagacggactgggacctgggcgtggctagccactccatc
aacaggaaagggaagatcacagtaagccccgcccacggctactggttcctgagtctccgg
gataagaacgactacgcgttccgaacggaaccgtcgacagcgctgggcctcaaccacaaa
cccaaccgtatagggatctacgtagactgtgataagggacaggtgtcgttctataatgtg
gacgctaagatgctcatctatacattcaccgacagcttctcggatgtcattcatcccttc
ttcagcccttgcaccaataagtctggcaggaacgaggcgccgctcatcatttgtcctgtc
tcgatgcctctggtggactga
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