Oncorhynchus mykiss (rainbow trout): 118937835
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Entry
118937835 CDS
T07259
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118937835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
118937835
03037 Cilium and associated proteins [BR:
omy03037
]
118937835
Transporters [BR:
omy02000
]
Other transporters
Pores ion channels [TC:
1
]
118937835
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
118937835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
WHD_CED4
Motif
Other DBs
NCBI-GeneID:
118937835
NCBI-ProteinID:
XP_036795455
LinkDB
All DBs
Position
12:complement(96728982..96753421)
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AA seq
566 aa
AA seq
DB search
MSRFTSAFVASPYRSDQAPKPTDKRWSRPPEGLVVPQDVERGLGPWSKDQGPPSSDPPLP
PQLWGPKRQLGQSSPGPRVPMDTATRYRMTSRQQTGTAILVRGCRRQSPLPLQGTAVGRL
GLSEEEAKEQMENDTVELVRELVTMPSRDRVKAVRGLPVSLGERRNIRCRVLAEKFSRRS
LERTSCTDCWEQISLSVRRCSSVVFFRQSLSLWRGSLREISGRFGSAVLCYFLFLRWLLL
FNLLSSLLNLSFITLPWALLGTDTQGAGATAGFRGLELLTGVGWFNVSMLYYGVYRSNSV
LSGGQSSYNIQLAYLFTITSYMLLCGASVTYSMAGCLQTGVVASGVAAQRPGSLSGRGDD
YWRLLCSWDFSLLHHADIHTHRTNLLVHLKESLRESRVERELSVSDKMRACLVRLAVWLL
SVCLATGACVAVYYLCQHNLQCVVTSPSPEDVLTEAWSLLLPVAVCVLNTFISLLYTHTH
RLERYDSPRTRVYVTVLRNAMLKVSILAVLCYYWLALVPGNVPCWESYVGQDVYRLVIVD
FIFCLLGSFCGEYLYNLPIYLWLFHV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctttaccagtgccttcgttgcatctccttataggagtgatcaggctccaaaa
ccaactgataagaggtggagtaggcctccagagggccttgttgtaccccaggatgtggag
agggggctggggccatggagtaaggaccaggggccgcccagctcagacccccctctcccc
cctcagctgtggggacccaaacggcagctaggccagtccagccctggacccagggttccc
atggatactgctaccaggtacaggatgaccagcagacagcagacaggaacagctatcctg
gtgcgtggttgtcgcaggcagagtccgcttcctctacagggtacagctgtagggagactg
gggctgtcagaggaggaggccaaggagcagatggagaacgacaccgtggagttggtgaga
gagctggttaccatgccgtccagagacagagtcaaagctgtacgaggccttcctgtaagt
ctgggggagcgcagaaacatcaggtgccgtgtcttagcagagaagttctccaggaggagt
ctagagagaacaagctgcactgactgttgggagcagatctcactgtctgttcgtaggtgc
agcagtgtggtgtttttcagacagtctctctctctgtggcgcggttctctgagggagatc
agtggaaggtttggttctgctgtcctctgctacttcctgtttctaagatggctgctcctc
ttcaacctcctctcttccctcctcaacctctccttcatcacgttgccatgggcgctgctt
ggcaccgacactcagggcgccggggcaactgccgggttcaggggactggagctcctcact
ggagtggggtggttcaatgtgtccatgctgtactatggtgtctacaggagtaacagtgtg
ctgagtggaggccagtctagttataacatccagctagcttacctctttaccatcacctcc
tacatgctgctctgtggagcctcagtcacatacagcatggcagggtgtctccagactggt
gttgtggcgtcaggtgtagcggctcagagacctggctctctgtctggaagaggagatgac
tactggagactgttgtgtagctgggacttctctctgctgcaccacgcggacatacacaca
cacaggaccaacctgctagtacatctaaaggagtctctaagggagagcagagtggagaga
gagctgtctgtgtcagacaagatgagggcctgtctggtccgtctggctgtctggcttctg
tctgtctgtctggctactggggcctgtgtggctgtctactacctctgtcagcacaacctg
cagtgtgtggtaacgtcccccagtccagaggatgtcctgacggaggcctggtctctgctg
ctgcctgtagcagtgtgtgtcctcaacaccttcatatcactactctacacacacacacac
agactggagcgctacgatagcccacgtacacgcgtctacgtcacggtgctcaggaatgcg
atgctgaaggtgtctatcctagccgtgttgtgttactactggttagcgctggtccccggc
aacgtcccgtgctgggagtcgtatgttggtcaggatgtgtaccggctggtcatagtggac
ttcatcttctgtctgctgggatccttctgtggagaatacctctacaatttgcccatctat
ctgtggttattccatgtttag
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