Oncorhynchus mykiss (rainbow trout): 118938331
Help
Entry
118938331 CDS
T07259
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
118938331
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118938331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
118938331
NCBI-ProteinID:
XP_036797486
LinkDB
All DBs
Position
13:56688583..56919047
Genome browser
AA seq
2270 aa
AA seq
DB search
MQSFSRERSGFHGNQPCYQQEHHELSRLESYRQHPHHGQTRQVYEAHALATATGMPPAGP
GAGPGPGSGPIPGPKDCYSQQAYPGYPQGNGGGVGGGVGGGGGSTPHDKKAYSGGSQGPP
PTPQHMQAGGYSNHMGPGGYPAQYMSEGHLHQSKWDDPAQLAQYEQEMVGRMEPGPPGSS
QYLDQNMLAHSQSQCHQPHQASAPVYTSPHHQPHPANPGQSPLMYPQSHLHYPQHPPSPS
PSSSSYMEKCSPMPHCYKGYSMPPSSQYTRQMGSHSGLKQGGYRPPPQNSYSYQQTPSRG
GYEPQPPLQGIPTPQETHPKYQHFSQPQQNYCLSELSVRSPEQYYQTCSPASSHSPARSV
GRSPSYSSTPSPLMTNPESFQYSQPPMTPGAASSSSSSSAGLQDQGLLMPPRSHPSSSPN
VAHPTPQHSYTQGVSMKERFSEKLLANPSLWSLNALTSQVENISNNVQQLLLSEAMVANK
KGAKRSSIGSSGGSSSKKEEVYKGVPGGPEGQHGGGPMQDPYSTNQHQLVPMEMQEGGYS
SSSDEQLERGYYYCGQGRSPAQAPNNTHLGLDTASSCSMTSPDDMSTRSGDSVSGLQSVA
SRDNMTPDPRSQGGHEPRQTSMKSVGDERSPVSVTIPSPMKQESQSPPDIQRLGLPLKEN
FEELAWTEKIADYEDDGVKKTSDSESDRRGSDNVTDTSEKREKWPEDEKGPALYSKINKA
VTEGKSYCYDENMYHKIQNKYDRGKGDSADKSPSLSDSSHKGDLGQEMKSEAFKSESPTD
SESSVKTSPYISRGDLDQDQYLTEKEDSSENTSPTPRGEALDQRLSASEKRESREEEEED
EEGEEERKQNSISSPLSAEEREGEESESLPSTERDLNNRKSPQEEPSGELCSRTEGQSLA
EPQPYSNTESAETESQAAQPDATAAAAESPESGSAICDTPPQSHSAMMVFSALSEIATPP
APSHTRDHIDHSDSNVLEPDSPQLPGKSILHSAPSWANTPPSPKKGDEDMEPGISCPSAV
TPSAKPEPVALSAHPQAFGRKHGRGRRRLMHSSVEFRRQLSVEREGESAPSPPQKPCMPS
SKSALFSDQLDMAAHQDIITTSETPKLLVEGSRSRMCTRSFNAQDTPPKDPQPPERRKPG
RKPGSKPGPKPGPKSGLKPGPKPGLKPGPKPGSKPSLKPGPKPGLKPDSKPSQKPGLKPG
PKPGPKTVLKPGPKPGPKPGPKPGSKPNEGAPRGRPRGTGSKSKLAEQEGPIPLITGGPG
RGQKSLSINSQQGDGKQEVKAPSKDGKNMVLRSRKPPQDKLPKEKEKAQSEGILTQTLTG
ITKSNAVLQNEERMSIEPAIPVFPNQTDTSITDTSVTDSSKPDTSVTDTSKPDTSVTDTS
KPDTSVTDTSVTDTSVTDTRVTDPSKTNTSITDTSKPDTSVTDTSKPDTSETDTIATDVS
VTDTRVTDTSVSDPNVTDTSVTDTSVTDTSIKDNSVTNNSVTDISIPVAPPEKPKEPTVA
VPLETAPVPPLKRKPSPLPLEPPVKKKRGPKPKPKQPQPETPHSDQANQPPLVKPKEMGV
RGPKRRLKRGRHIKASLITVLTKDNPPPTMADGDVVSEMPSVPSQCPTKTKYLPPRKGRG
LKYEAMVQKINSGTGSKKHPPTPQPESTEATVDEVTSKPVSLPVSEESEAPVAAVSAPDV
SREELARDVGSSTGAQNTEQERRVQQNTGEGVQPEPLPSGVPDAAAASGANKPTRTKRRK
WAMVESTDATVVAMETGSLIINTPRLAKQRAIKNNHEMHLKQRRRKRKGGQPSEGPVADE
EVETTTAEQQTETPTDIALTTTPALPAGPGEITDSLQVIATEMIQPPPSKRGRKPSSSPS
KKRGRAPGEQQSSKPLRVHKKPGPKKGIKDAMEVIEAVVKAAGREARLKKKKWKKESPAV
SEEKQPEPSLKQVLSKTPESRIKHSFCPYVRMDSSGDFTSLCTIVNRRDEELKMVLQNLR
KKSPDKIKNPVTVAKAIPSSSAMLQGPLVNKTLIDRCLTCCLCGKPANYRELGDLCGPYF
PEDSIPRKILSARHIETPRENREKISSNSSIREPSSSTPTSEGDPGFKKEVSKKVDMETV
TKQGSSSSGGSHHHQPHPHHWRPRRAERAPAEGGSTHRPTLRDRFRRMQKLQGERRAAEA
TAGGQEGGNGGGGLLQRLQGEAEAKEHWAHENCAIWTNGIIMVAGRLYGLKEAVHTSTET
SCSKCQRVGASISCCWKGCPHKYHYICAKEIGCMFQDDNFSLKCPKHEAL
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgttcagcagagagaggagcggtttccatggcaaccagccctgctaccagcag
gagcaccatgaattatcacgcctggagagctaccgacaacacccccaccacggacagacc
aggcaggtctacgaggcgcacgcgctggccaccgctacagggatgcctccagcgggacca
ggagccggacctggaccaggaagtggacccatacctggacctaaggactgttacagccag
caggcataccctggatacccccagggtaatggaggcggtgtgggtggtggtgtgggtggt
ggaggaggttcgacgcctcatgataagaaggcttacagtggggggagccaaggacctcct
cccactccccagcatatgcaggcaggcggctacagcaatcacatgggcccggggggatac
ccggcccagtatatgagtgaaggccacctccatcagtctaagtgggacgacccagctcag
ctagctcagtacgagcaggagatggtaggcaggatggagccaggtccccctgggtcctcc
cagtatctggaccagaacatgctggctcactcccagagccagtgtcaccagccccaccag
gcctctgctccggtctacaccagcccacaccaccagccccatcccgcaaacccaggccag
tccccgttgatgtacccccagagccacctccactacccccaacatcccccgtccccctcg
ccatcctcctcctcctacatggagaagtgcagcccaatgccccactgttacaagggatat
agtatgccgcccagctcccagtacactaggcagatgggcagccacagtggtctgaagcag
gggggataccgcccgccaccccagaacagttacagctaccaacagactccctccaggggt
ggctatgagccccagcccccactgcaaggcattcccactccccaggagacccaccccaaa
taccaacactttagccagccccagcagaactactgtctgtccgagctgtccgtcagatcc
cctgagcagtactaccagacatgtagtcccgcctccagccactcccctgcacgctctgta
ggccgctcgccctcctacagctccaccccttcccctttgatgaccaatccagagagcttc
cagtacagccagccaccaatgaccccaggggcggcttcttcgtcctcctcttcctcagcg
ggtctgcaggaccaaggcttgctgatgccgccgcgctcccacccgtcctcgtcccccaac
gtggcccacccaaccccgcagcacagctacacacagggggtttccatgaaggagcgcttc
tctgagaagctgcttgccaaccccagcctgtggagcctgaatgccctcacctctcaggtg
gagaacatctccaacaatgtgcagcagctgctgctctccgaggccatggtcgccaacaag
aagggggccaagcgcagcagcattgggagcagtggaggcagctcctccaagaaggaagag
gtttacaaaggagtgccaggaggccccgagggtcagcacggtgggggtcccatgcaggac
ccctacagcaccaaccagcaccagctcgtccccatggagatgcaggagggggggtactcc
agtagttctgacgagcagctggagagagggtactactactgcggccagggcaggagccca
gctcaggcccccaacaacacacacttgggcctggacacagcctcatcctgctccatgacc
tctccggatgacatgtccacccggtctggtgactctgtgtccggcctgcagagcgtggct
tccagggacaacatgacccctgaccccaggtcacaggggggacacgaaccccgacaaacc
tccatgaagagcgtgggggatgagaggtcccccgtgagtgtgacgattcccagccccatg
aagcaggagagccagtcccctccagacatccaacgtcttggcttgccactgaaggaaaac
tttgaggagttggcctggacagagaaaatagcagactacgaggatgatggcgtgaaaaag
acctccgacagcgagagtgaccgcagaggcagcgataatgtcacagatacctctgagaag
cgggagaaatggccagaggacgagaaaggcccagcgctgtatagcaagatcaacaaagca
gtgaccgagggaaagagttactgctacgacgagaacatgtaccacaagatacaaaacaaa
tacgaccgaggcaaaggggactcggcggataagtccccaagcctctcagactccagccac
aagggagacctgggccaggagatgaaatcagaggccttcaaatccgaatctcccactgac
tctgagagctcagtgaagacatccccctatatttccaggggtgaccttgaccaagatcaa
tatttaacagagaaggaagacagctcggagaacacatcccctaccccacggggcgaggct
ttggaccagaggctctccgcctcagagaagagagagagcagagaagaagaggaggaggat
gaggagggggaggaggagagaaagcagaactccatatcttctcctctgtctgctgaggag
agagagggagaagagagtgagagcctgccatcaactgagagggacctcaacaatagaaag
agcccacaggaggagccttctggagaactgtgcagcagaacagaaggccagagcctggct
gagcctcagccttacagtaacacagagtctgcagagacagaaagccaagcagcacaacca
gatgcaacagcagcagcagcagaatccccagaaagtgggtcagccatttgtgacactcca
ccccagtctcactcagccatgatggttttctcagctctcagcgagatagcaacacctcca
gctccgtctcacaccagggaccatattgatcacagcgattccaacgtgctggagcctgac
tcccctcagctgccggggaagtccatactgcactcagcgccctcctgggccaacacccca
ccctcgccaaagaaaggtgatgaggacatggagccgggcatcagctgcccaagcgctgtg
accccttcagccaagccagaacccgtggccctatctgcacacccgcaggctttcggccgg
aagcacggccgaggcaggaggagactgatgcactcaagtgtggaattcaggagacagctg
agtgtggagagagagggggagagtgccccctcgccaccgcagaaaccctgcatgccctcc
agcaagagtgctctgttctccgatcagctagacatggccgctcaccaggacataatcaca
acgagcgagacacccaaactgcttgttgagggctcccggtccagaatgtgcactcgctca
ttcaacgcgcaggacactcctcctaaggatccccagccccctgaaagacggaaaccaggg
cggaaaccaggttcgaaaccaggcccaaaaccaggcccaaagtcagggttaaaaccaggg
cctaaaccaggactaaaaccagggccaaaaccaggttcaaagccaagtctaaaaccagga
ccaaaaccaggtttgaaacccgattcgaagcccagccaaaaaccaggtttaaaaccgggg
cctaaaccaggcccaaaaactgttctaaaaccagggcctaaaccgggtccaaaaccagga
ccaaaacctggttcaaaaccaaatgaaggagcaccccgtggtcgtcccaggggtacgggc
tctaagtcgaagttggcagaacaggaaggtcccattccactcataacagggggtccagga
agaggccagaagagcttgagcatcaacagtcagcaaggtgatgggaaacaggaagtgaaa
gctccaagcaaggacggaaagaacatggtcctgagatccaggaagcccccccaggataag
cttccaaaggaaaaagagaaggcgcaatctgagggaatcctgactcaaaccctgacaggt
ataacaaagtccaatgcagtgttacaaaatgaggaacgtatgagcatagagccagcaatc
cctgtcttccctaaccagacagacacaagtataacagacaccagtgtaacagactctagt
aaaccagacaccagtgtaacagacaccagtaaaccagacaccagtgtaacagacaccagt
aaaccagacaccagtgtaacagacaccagtgtaacagacaccagtgtaacagacaccaga
gtaacagaccccagtaaaaccaacaccagtataacagacaccagtaaaccagacaccagt
gtaacagacaccagtaaaccagacaccagtgaaaccgacaccattgcaacagacgtcagt
gtaacagacaccagagtaacagacactagtgtatcagaccccaatgtaacagacaccagt
gtaacagacaccagcgtaacagacaccagcataaaagacaacagtgtaacaaacaacagt
gtaacagacattagtatacctgtcgctccacctgagaaacctaaagaaccgactgtagct
gtacctcttgaaactgcacctgtacctccactcaaaagaaaacccagtcctctgcctcta
gagcctccggtgaagaaaaagcgaggtccaaaaccaaaaccaaaacagccccagcctgaa
actccccattctgaccaggccaaccagcctccattagtcaaacccaaggagatgggtgtc
cgagggcccaagagaaggctaaagagaggcaggcacatcaaggcctctctgatcactgtg
ctgaccaaagataaccctcctcccacgatggctgacggtgatgtggttagtgaaatgccc
agtgtcccttctcagtgtcccactaaaaccaagtacctccccccgcgcaaaggcaggggt
ctgaaatacgaggccatggttcagaaaataaactcgggcaccggttcgaagaaacacccg
ccaacaccacagcccgagagcacagaggcgacagtagatgaagtgacgtcaaagcctgtg
tcgctgcccgtctcggaggagagcgaggccccagtggcggcggtgagcgcccctgatgtg
tcacgggaggagttagcaagagacgtggggagctccacgggggcccagaacacagaacag
gagagaagggtgcagcagaacaccggggagggggtgcagccggagccactcccatcaggg
gtgccagacgctgcagcggcgagcggcgccaacaaacccaccaggaccaagaggaggaaa
tgggccatggtagagagcacggacgccacggtggtcgccatggagacggggagcctgatc
atcaacacgccgcggctggccaagcagagggccatcaagaacaaccacgagatgcacctg
aaacagaggaggaggaagaggaaaggaggacagccttcagaggggcctgtggctgacgag
gaggtagagacaacaacagcagaacagcagacagagacacccactgacatagcgttaaca
acaacgcccgctctaccagccggcccaggtgagatcacagacagcctgcaggtgatcgcc
acagaaatgatccagccgcctccctccaaacgagggaggaagccctcttcatccccctcc
aaaaagagagggagagcaccaggtgaacagcagagcagcaaacctctgagggttcacaaa
aaacctggtcctaaaaagggaatcaaagacgccatggaggtgattgaagcggtggtaaag
gctgcagggagggaggccagactcaagaagaagaaatggaaaaaggaaagtcctgcagtg
tcagaggaaaagcagccagagccctctctcaaacaggtactgagtaagactcctgaaagc
agaatcaaacactccttctgtccatatgtgcgtatggacagctccggagacttcacctct
ctctgtaccatcgtcaacaggcgcgatgaagagctgaagatggtgcttcagaatctccgg
aaaaagagcccggacaaaattaaaaacccagtcacagttgccaaggcgatacccagctcc
tcagctatgctccaggggcccttggttaacaaaacgttaattgacaggtgtctaacgtgt
tgcctgtgtggaaagccagcaaattaccgtgagctgggggatttgtgtgggccctacttc
ccagaggatagcatcccccgcaaaatcctgtcagcaagacatatagaaaccccgagggaa
aaccgagagaaaataagctccaacagtagcatcagggaaccaagcagcagcaccccaaca
agcgaaggagaccccggcttcaaaaaggaagttagtaaaaaggtggatatggagacagtc
acaaagcagggcagtagtagtagtggtgggagtcaccatcatcagccccacccccaccat
tggcgccccaggagggcagagagggcaccggcggagggcggaagcacgcaccggcccacc
ctacgggatcggttcaggaggatgcagaagctccagggggagaggagggctgcggaggcc
acagctggtggtcaggaagggggcaatggaggaggaggcctcctccagagactgcagggg
gaggctgaggctaaggaacactgggcccatgagaactgtgctatctggaccaatgggatc
atcatggtggcagggaggctgtacggcctgaaagaggctgttcacacctccacagaaacg
agctgttccaagtgccagagagtgggcgcgtccatcagctgctgctggaaaggctgccct
cataaataccactacatctgcgccaaggagataggctgcatgttccaagacgacaacttt
tcactgaaatgtccgaaacacgaggctttgtaa
DBGET
integrated database retrieval system
