Oncorhynchus mykiss (rainbow trout): 118938358
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Entry
118938358 CDS
T07259
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118938358
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118938358
04082 Neuroactive ligand signaling
118938358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
118938358
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
118938358
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
118938358
NCBI-ProteinID:
XP_036797864
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All DBs
Position
13:65529908..65878033
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AA seq
1515 aa
AA seq
DB search
MKCLNMSVGRGLTLAFPALLCSLVTLVTLVMEVEGQKVPILNIAVILGRTRYISDRDIRA
LWSKDDPMDVNVVTVLVNETDPKSIITHVCDLMSGTKIHGVVFGDGTDQEAIAQILDFIS
SQTLIPILGIHGGSSMIMADKDDKSTFFQFGASIQQEALLMLSIMEEYDWHIFSIVTSKF
PGYQEFINVLKSTVDNSFVGWDLQHIITLDAVEEDSKSQIMLKKVQSPVVLLYCSKDEGV
FILEEARSLGLTGFGYIWIVSSLTSGTTETVPEEFPSGMVSVSSEDWDYPLEARVRDGLG
IITSAASAMLEEYGEIPEARTSCYGTQPEKPSKVPPLALHKYMKNVTWEGRDLSFTEDGY
QQNPKLVVIVLNKEREWEKMGRLDNRSLTLKYHVWPRFNSFGDAETDDNHLSIVTLEEKP
FVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFTY
DLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISV
MVSRSNGTVSPSAFLEPFSATVWIMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGRDPH
GPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQ
EEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIRKNYPNMHEYLSKYHQTGVQD
ALVSLKTGKLDAFIYDAAVLNYAAGRDEGCKLVTIGSGYIFATTGYGIALHKGSYWKRQV
DLAILAIIGDGEMEELEAQWLTGICHHEKNEVMSSQLDIDNMAGVFYMLATAMGLSLITF
ISEHLFYWRLRYCFTGVCTGTPGLLFSISRGIWSCIHGVHIDMKKKSELDFSPQANMLKL
IKSAKQMTNMSNLSTSRINSPKRAAEFMHSAGPMIMDMMAEKGNFIYADNRSYAPKEVIY
GDTGDLQAYLANRHKDHLNNYIFQGGQHPLTLNESNPNSVEVAVSADAAQTNAKPRGLWK
KSVDTMRQGPGVPGPDMLSPDPRISMKTQRYLPEEAAHSDISDCSSRGGGGSYQDPENNM
HLKNKDGLKKRQLPSKYPRDCSEVELSYLKTKQGSGGGGGVGGQGQGQIYTIDSDRELNL
NSDPLHYRESRGLAADDLDYPEIYSDHNDNYRKCQDQPIIHLNSSPLHHADVDLLPDSTY
SKHYGVKDKSLSLSPHETNDRSKQTHCRSCLSKFPASSSYTPGHYTPTNTASVAAAAAAA
ARSPYNRCEACLHTANLYDISEDQLLQDALLTNQGMHQHQDEMFGHYWPQTDGPHVQKRN
RLRMSRQHSFDNIMLEKPKEIDLGRPARSVSLKEKDRCFLDDSPYANLFSVRQADKLLGS
RSMLFNLEENKRSKSLYPEHGSDNPFMASSLRDDTRLVHGRSSSDIYKQLGGGGGLKTSQ
RNENNLRSSVKSAASYCSRDGGRIPANDMYITEHVMPYVANKTSSYSAAPRGVLNSAQFS
NRRVYKKIPSLESDV
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctcaacatgtcagtgggcagggggctgaccttggccttcccagctctcctg
tgttccctggtgaccctggtgaccctggtcatggaggtcgaaggtcagaaggtccccatc
ctcaacatcgctgtgatcctgggccgcacgcgctacatctccgaccgggacattcgggct
ctctggagcaaagacgaccccatggacgtcaacgtggtcaccgtattggtcaacgagact
gaccccaagagtatcatcacccacgtgtgcgacctgatgtctgggaccaagatccacggg
gtagtgttcggagacgggacggaccaggaggcaatcgctcagatattggattttatttcc
tcccagacactgatccccatcctgggcatccacgggggatcctccatgatcatggctgat
aaggacgacaagtcaacgtttttccagttcggagcttccatccagcaggaggcgctgttg
atgttgagcatcatggaggagtacgactggcacatcttttccatagtcacctccaagttc
cccggataccaggagtttatcaacgtcctcaagagcaccgtggacaacagttttgtaggc
tgggacctgcagcacatcataacattagatgctgtggaggaagacagtaagagtcagatc
atgttgaagaaggtccaatccccggtggttctgttgtactgctctaaagacgagggagtc
tttatcctggaggaggctcgctccctgggcctcaccgggttcggatacatctggatcgtc
tccagcctgacctccggcaccaccgagacggtacccgaggagttcccctcgggcatggtg
tccgtctcctctgaggactgggactaccctctggaggcgcgggtgagggacgggctgggc
atcatcacgtccgctgcctccgccatgctggaggagtacggcgaaatacctgaagcgagg
acttcctgttacgggacacagccggagaagccttccaaggttcctcctctcgctctgcac
aagtatatgaagaatgtaacatgggaaggtagagacttgtcgtttacagaagatggttac
cagcagaaccccaagctggtcgtcatcgttctcaataaggaacgagaatgggagaagatg
ggtcgtttggacaaccgtagcctgacgttgaagtaccacgtgtggccgcgcttcaactcg
ttcggcgacgcggagacggatgacaaccatctgtccatcgtgactctggaggagaaaccc
ttcgtcatcgtggaagacgtggagaggctcactggaacctgtatgaggaattctgttccc
tgtaggaagcacatcaaggacaacaccacagaggcgggcgggacctacattaaaaagtgc
tgtaaaggattctgcatcgacatcctgaagaagatcgcgaagtacgtgaagttcacctac
gatctctacctggttaccaacggtaaacatgggaagaagatcaacaacgtgtggaacggg
atggtgggagaggtggtctataagaaagctgtcatggccgtcggctctctgacgatcaat
gaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaaactggaataagcgtc
atggtctcccgtagcaacggaaccgtctccccgtccgccttccttgagccgttcagtgcg
acggtgtggatcatgatgtttgtgatgctgttgttggtaacagcgatggctgtgttcatg
tttgaatacatcagccctctgggctttaacaggaacctggcacaggggagagacccccac
ggcccatcgttcactatgggtaaggcggtgtggctgctgtggggtctggtgttcaacaac
tctgtcccggttcagaaccctaaaggcaccaccagtaagttcatagtgtcggtgtgggcc
ttcttcgccgtcatcttcctggcctcctacacagccaacctggctgccttcatgatccag
gaggagtttgtagaccaggtcacgggactgtctgacaacaagttccagaacccgtatgcg
tactcccctccgttccgttttgggacggtccccaacggttcgacagagaggaacatcagg
aagaattaccctaacatgcacgagtacctgtccaagtaccaccagacaggggttcaggac
gctctggtcagcctgaagacgggtaaactggatgccttcatctacgatgctgctgtgttg
aactatgcagcgggtcgagacgagggctgtaagctggtcaccatcggcagcgggtacatc
ttcgccaccaccggctacggcatcgctctgcataaagggtcctactggaaacgccaggtg
gacctggctatactggctattataggagacggtgagatggaggagctggaagctcagtgg
ctaacggggatctgtcaccatgagaagaacgaggtgatgtccagtcagctggacatcgac
aacatggccggagtgttttacatgctggctaccgcaatgggactgtctctcattaccttc
atatcagagcatctcttctactggaggttgagatactgtttcactggagtctgtacggga
acaccaggactactgttctctataagcagggggatttggagttgtatccacggcgtccac
atcgacatgaagaagaagtccgagctggattttagccctcaggctaacatgttgaagctc
atcaagtcagccaaacagatgaccaacatgtccaacctgtctacgtccaggatcaattcc
cccaagcgggcggctgagttcatgcactcggcggggcccatgatcatggatatgatggct
gagaaaggtaacttcatctacgccgacaatcgaagctacgcccctaaagaggtgatctac
ggtgatacgggcgacctccaggcgtacctggccaaccgacacaaagaccacctgaacaac
tacatcttccaaggaggacagcaccctctgaccctcaacgagtcaaacccaaactccgtg
gaagtggcggtgagcgcggacgccgcccagaccaacgccaaacccagaggcctgtggaag
aagtccgtggacacaatgcggcagggtccaggtgtccccggccccgacatgctgtccccc
gacccccgcatctccatgaagacacagcgataccttccggaggaagcagctcactcagac
atctctgactgctccagccgaggaggaggcggttcgtaccaggacccggaaaacaacatg
cacctgaagaacaaggacggattaaaaaaaagacagttgccgtcaaaataccctagggac
tgcagcgaagtagagctgtcctacttaaagactaagcagggcagcggagggggtggagga
gtgggaggacagggacaaggacagatctacaccatagactcagatagagaactcaatctc
aactccgatcctttacactaccgcgagagtcgaggcctggccgccgacgacctggactac
ccggagatctactctgaccacaacgacaactacaggaagtgtcaggatcagccaatcatc
cacctcaactcgtccccgctgcaccacgccgacgtcgacctgctcccggactccacttac
tccaaacactacggcgtgaaggataagagcttgtccctgtcgccccacgagaccaacgac
cgttccaaacagacccactgccgctcctgtctgtccaagttccctgccagtagcagctac
accccgggtcactacacgcccacaaacaccgcttctgtcgctgccgcagccgccgccgcc
gcccgctcgccctacaaccgctgcgaagcgtgcctccacactgctaacctctacgacatc
agcgaagaccagctgctccaggacgccctgctgaccaaccagggaatgcatcaacatcag
gacgagatgttcggccactactggcctcagacggacggtccgcacgtccagaagagaaat
cggctgcgtatgtcccgccaacactcgttcgacaacatcatgctggagaagcctaaagaa
atagatctgggtcgtccggctcgctccgtcagcctcaaagagaaagaccgctgcttcctg
gacgattctccctacgccaacctgttcagcgtccgccaggccgacaagctgttgggctcc
aggtcgatgctgttcaacctggaggagaacaaacggagcaagtcgctgtaccccgaacac
ggctctgacaaccccttcatggcgtcttcgctgagggacgacacgcgcctcgtccacgga
cgcagctcctccgacatttacaaacagctgggaggaggaggagggctcaaaacatcgcaa
cgcaacgaaaacaatctgagatcctcggtcaaatccgccgcttcctactgctcccgggac
ggaggacggataccagccaatgacatgtacattacagagcatgtgatgccttatgtagcc
aataagacaagttcttactcagccgcaccgcgaggggtactaaactcagcccagttcagc
aatagacgggtttataagaagatacccagtctggagtcagacgtttaa
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integrated database retrieval system
