Oncorhynchus mykiss (rainbow trout): 118938475
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Entry
118938475 CDS
T07259
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
118938475
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118938475
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
PYRIN
DeaD_C
Motif
Other DBs
NCBI-GeneID:
118938475
NCBI-ProteinID:
XP_036798415
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All DBs
Position
13:complement(66751792..66775949)
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AA seq
1110 aa
AA seq
DB search
MSLSGARKEGGPASKMRLSGERKDGGPASKMSLSGEREEGGPASKMRLSGEHDTKAKSPI
KQERPASPVPSFVSMKSDRSMDALIYFREGDFSTEQRNQQERSESEILSGQSSQSHQTDL
ASIFSLLEEKIMTFVKNELRLFKRILSPELPEGFESRKQEVVDAEDEKQESNAREGALKI
TLHILRKMNQKELADTLEKNELAVICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTE
LYITEGGTGQVNNEHELRQIETTTRKQSRPETAIKCNDIFTPLTGQDKPIRTVLTKGVAG
IGKTVSVQKFILDWAEGKANQDVQFVFSFPFRELNLMKEDKHTLIELLNHFSVETKVSRI
SNYNKYKVLFIFDGLDECRLPLDFQKNKICCDVTESTSVDVLLTNLIKGNLLPSALLWIT
TRPAAANKIPSGCVDQVTEVRGFNDPQKEEYFRKRFSDEDMASRIISHIKTSRSLHIMCH
IPVFCWISATVLEHMLKHKREEMPKTLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNKES
ILLLGKLAFQQLVKGNLIFYEKDLKEAGIDVNEASVYSGLCTQLFKEECGLYQDKVYCFV
HLSIQEFLAAVYVFLSFINNNANLMAKAQSTSRNLSVRKRHKPKFTVFKSAVDKALQSET
GNLDLFLRFLLGLSLESNQKHLRGLLTKTRSSSQSHEETVKYIKKKIRENPSPERSINLF
HCLNELNDHSLVEEIQSYLRSGSLSKHNLSPAQWSALVFVLLTSEKELDVFDLKKYSRSE
EGLLRLLPVVKASRAVLLSDCGVTEEGCASLVSALRSNPSHLRELDLSNNDLKDSGVKLL
SDGLGNPHCKLETLRLSGCVVTEEGCASLLSALRSNPSHLRELDLSYNHPGDSGARLLSA
GLEDPHCRLEKLNVEHGGENRMNPGLRKYVCDLTLDLNTVNRRLSLSEENRKVTCRTEEQ
PYPDHPERFDGCGQVLCREGLTGRYYWEVEWSGRGADIGVTYKGISRRGGVKECWLGYND
KSWSLYCSDNRYIGSHNNNHTTIDVHSSSSHRVGVYLDWPAGTLSFYRVSSDTLTHLYTF
TSTFTEPLYPGFRVYDDSFGIWDSSVSLCQ
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggagcgagaaaggaggggggccctgcctctaaaatgagactctctggg
gagagaaaggacgggggccctgcctctaaaatgagtctctctggggagagagaggagggg
ggccctgcctctaaaatgagactctctggggaacatgacaccaaagctaagagtccaatc
aagcaggagagaccagcctccccagttcccagctttgtgtccatgaagagtgaccggtct
atggatgctcttatatactttagagagggagacttttctactgaacaaagaaaccaacag
gagagatcagagtcagagattctcagtggtcagtcttcccagagtcatcaaacagacctg
gcctccatattcagtttgcttgaagagaaaattatgacatttgtgaagaacgagctgagg
ctgttcaagaggattcttagtccagaactcccagaaggctttgagagtcggaagcaggaa
gtggtggatgctgaagatgagaagcaggagagtaatgccagagagggggctctgaagatc
acactgcacatcctgaggaaaatgaaccagaaggagcttgctgacacactggagaaaaat
gagcttgctgtgatttgccaacgtgaactcaaatctaatctaaagaagaagtttcaatgt
gtatttgaggggatcgctaaacaaggaaacccaacacttctcaataagatctacacagag
ctctacatcacagagggtggaacaggacaggtcaataatgaacatgagctgagacagatt
gagacaacaaccaggaaacaatcaagaccagagactgcaatcaaatgtaacgacatcttc
acacccttaactggacaagacaaacctatcagaactgtgctgacaaagggagtcgctggc
attggaaaaacagtctctgtgcagaagttcattctggactgggctgaaggaaaagcaaat
caggatgtccaatttgtattttcattcccttttcgggagctgaatttgatgaaagaggac
aaacacactttgattgaacttcttaatcacttctcagtggaaaccaaagtttcaagaatc
tccaactacaacaagtacaaagttctgttcatctttgatggtctggatgagtgccgactg
cccctagacttccagaagaacaagatctgttgtgacgtcacagagtcaacctcagtggat
gttctgctgacaaatctcatcaagggaaatctgcttccttctgctctcctctggataact
acccgacctgcagcagccaataagatcccttcagggtgtgttgaccaggtgacagaggta
cgaggtttcaatgacccacagaaggaggagtacttcaggaagagattcagtgatgaggac
atggccagcagaatcatctcacacataaagacatcaaggagcctccacatcatgtgccac
attccagtcttctgttggatttctgcaacagtccttgaacacatgctgaaacataaaaga
gaagagatgcccaagactctgactgagatgtacacacaccttgtggtgtttcataccaaa
cagaagaatgaaaagtatcttgggaaagaagagacaggtccacactggaataaagagagc
attctgttactgggaaaactggcttttcaacagcttgtgaaaggcaatctgattttctat
gaaaaagacctgaaagaagctggcattgatgtcaatgaagcctcagtgtactcaggattg
tgcacacagctctttaaagaggaatgtgggctgtaccaggacaaggtgtactgcttcgta
catctgagcattcaggagtttctggctgctgtatatgtgttcctctcattcatcaacaac
aatgcgaatctaatggccaaagctcaatcaacgtccaggaatctttctgtgaggaaaaga
cacaagcctaaatttacagtcttcaagagtgctgtggataaagccttacaaagtgagacg
ggaaacctggaccttttcctccgcttccttttgggcctctcactggagtccaatcagaag
cacttacgaggtctactgacaaagacaagaagcagctcacagagccatgaagaaacagtc
aagtacatcaagaagaagatcagggagaatccctctccagagaggagcatcaatctgttc
cactgtctgaatgaactgaatgaccattctctagtggaggagatccaaagctacctgaga
tcaggaagtctctcaaaacacaacctgtcacctgcacagtggtcagctctggtctttgtg
ttgctgacctcagaaaaggagctggatgtgtttgacctgaagaaatactccagatcagag
gaaggtcttctgaggctgctgccagtggtcaaagcctccagagctgttctgctgtcagac
tgtggagtcacagaggaaggctgtgcttctctggtctcagctctgaggtcaaacccctca
cacctgagagagctggatctgagtaacaatgacctgaaggattcaggagtgaagctgctc
tctgatggactggggaatccccactgtaaactggagactctgaggctgtcaggctgtgta
gtcacagaggaaggctgtgcttctctgctctcagctctgaggtcaaacccctcacacctg
agagagctggatctgagctacaatcacccaggagactcaggagccagactgctctctgct
ggactggaggatccacactgcagactggagaaactcaatgtggaacatggtggagagaac
agaatgaaccctgggcttagaaaatatgtctgtgatctcacactggacctaaacacagta
aacagacgcctctctctgtctgaggagaacagaaaggtgacatgtaggacagaggagcag
ccgtatcctgatcacccagagagatttgatggctgtggacaggtgctgtgtagagagggt
ctgactgggcgctattactgggaggtagagtggagtggaagaggggctgatataggagtg
acatataaaggaatcagcaggagaggaggggttaaggaatgttggcttggatacaatgac
aagtcctggagcctgtactgctctgacaaccgttacattggctctcacaataataatcac
actaccatagacgtccactcctccagctcccacagagtaggagtgtatctggactggcca
gccggcactctgtccttctatagagtctcctctgacacactgacccacctgtacacattc
acctccacattcactgagcccctctatccagggtttagggtttatgatgattcctttggg
atttgggactcctcagtgtccctgtgccagtga
DBGET
integrated database retrieval system
