KEGG   Oncorhynchus mykiss (rainbow trout): 118941185
Entry
118941185         CDS       T07259                                 
Name
(RefSeq) syndecan-3-like
  KO
K16337  syndecan 3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514  Cell adhesion molecules
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118941185
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118941185
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:omy00535]
    118941185
Proteoglycans [BR:omy00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   118941185
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 118941185
NCBI-ProteinID: XP_036809034
LinkDB
Position
18:complement(52473210..52511642)
AA seq 434 aa
MKLPPCLMTILAALLAHSALGQTWVPSIDLEDSSGDEFYDDEDLFSGSGSGFPEMKVNPT
AVGVSFSTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGRE
RERERERERVREMERERERERERDREREREKERERERERERQREIERERERERERARAAQ
TTISPRGPAAVPMATTSTATPLAESVAPSSGVQDLVTTEEEDEDVYLSPDPTTSMPMETT
TEEEEEEEEVTTTDTETTPLPKTTAPPTTIGPALTERSSSAPFRPSVLVTTPIKAAPTER
STRPQQPSTTMNNELGVNGPSGDFEIREEDRRQGNEVVGRGLGMETGAEPDLIGNTINTG
SSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQAT
VTYQKADKQEEFYA
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgaagctgccgccgtgtctgatgacgatcctcgcggcgctgctcgctcactccgcgctg
ggtcagacctgggttccgtctatagatctagaagattcttctggagatgagttctatgat
gatgaagacctcttctcaggctctggatctggctttccagagatgaaggtcaaccctaca
gcggtgggtgtgtctttcagcactgaggagccccttcccctttccaccacccaggctact
ggccccgccccctcagccccacctgcagccgagcccaatcccaaccccgacgctctcccc
accccactacccactgagggagagggggagagtgggatagagtgggagagagggagggag
agagagagggagagggaaagagagagagtaagggagatggagcgggagagagaacgagag
cgggagagggatagagagagggagagagaaaaggagagggagagagaaagagagagagag
aggcaacgggaaatagagagggaacgagaaagagaacgtgaaagagcgagagccgcccag
accaccatctcaccccgtggcccggcggctgttcccatggcgaccaccagcacagcgacg
cctctggcggagagtgtagcaccctctagtggcgtgcaggacctggtcaccacagaagaa
gaggacgaggatgtctacctgtccccagaccccaccaccagtatgcctatggagaccacc
acggaagaagaagaagaagaggaagaagtgaccactacagatacagagaccacacccctc
ccaaagacaacagctccacccactacgattggcccagccctaactgagaggtctagctcc
gccccctttaggcccagtgttctggtgaccacgcctattaaagccgcacccacagagagg
agcacacgcccacagcagccttctacgacaatgaataatgaattaggcgttaatggaccc
agcggagactttgagattcgggaggaggaccgtcgccagggcaacgaggttgttggtcgt
ggccttggcatggagactggggcagaacctgatctgattggcaacacaattaacacagga
agttctgccgctcaacttcctcagaagaacatcttggagaggaaggaggttctgatagcg
gtgatagtggggggcgtggtgggggccctgtttgcagcgttcctggtcatgctgctggtg
tacaggatgaagaagaaagatgaaggcagctacacactggaggaacccaagcaagccacc
gtcacctaccagaaagctgacaaacaggaggagttctacgcataa

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