Oncorhynchus mykiss (rainbow trout): 118941427
Help
Entry
118941427 CDS
T07259
Name
(RefSeq) rho guanine nucleotide exchange factor 38-like isoform X1
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
118941427
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118941427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
BAR
SH3_9
SH3_2
SH3_1
Nucleoporin_C
SH3_3
Motif
Other DBs
NCBI-GeneID:
118941427
NCBI-ProteinID:
XP_036809919
LinkDB
All DBs
Position
19:5405466..5424393
Genome browser
AA seq
930 aa
AA seq
DB search
MAGRSLGGGGATELSCDRYGRAGAWEREGPQSSPVTGMAGQVTGRGRGHSTCVALAVVHY
STPVALLRLSLPPSLSPSLFLPGWTESTGGEEEGFLVKMDPNKEANNGSEKEKEKEKVVK
RRTRPNFLRYMHLERRKTDTIVVANDDTAADIKGDINLGTLVRRSQSDKTEYSAKLKEKM
APLSPLSSILASPALDPAEVRLRKMSRRSKVIQELVQTERDFLTDLELCIREVVKPLRDR
QVVDVDRLFTNMETVCEVSAALLHRLQEATAEPDPEALVIGEVFIQAKAALEDVYKIYCY
HHDDANSLLKSYEKEEGIKQHFITCVLSLKRIYDQEGKPNLLDMGSLLIKPVQRVMKYPL
LLGELWQATPSDHPDNRPLQEALTAAKIINVNINEFKRRKDIVMKYKRTEEDGGTLMGKL
NKFSIHSIRKKSDRLTGYLKILTGVEPQVRDEVFDKEEKLFRSLEKAVRQLVKNVHCYLI
HIQEMVGVAVQNAADLEDIMKDPDKIDTNSTQHMKNGNNPYKHFKERMAHLVLAPLSSLQ
GMFAAPQKLIQKRYDKLLDYCSRLERSPSSSTSSASSSSSSPSPVSEDQGQVAARRDYAA
LNAQLVEELQRFNMAAHTILSNCVLCLVTLLKGLMDTACHHAPSIQQLPAPLSNISEVQS
SIMEELNNLTVVKDNAQTLIERKVSFEKTKKILAVPEIQRQTEGNRARLLDEYPADRLFQ
LKRNCNGCQEQDVSLLEGELVGLLEDTDPLGSRGRWLVDTGSTQGYVYSSFLKQYNPNRD
HGRPGQGTGTGITEPQQPIVVLDEDFDNLSLFVSGSGRNNSIRSRSSIPNFSLYNTSSTS
LDRCSTPSSLQGDTEPDIHQDLDTEPDNQQFYAVYGFQARCDQELTMQENQHVRILKFSD
LGGNKDWWLAEANGQKGYVPANYLGKMSYA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaggagcctgggagggggaggggccacagagctctcctgtgacaggtatggc
agggcaggtgcctgggagagggaggggccacagagctctcctgtgacaggtatggcaggg
caggtgactgggagagggaggggccacagtacctgtgtggcgttggcagtagtgcactac
agtacacctgttgcacttctcaggctctctcttcctccgtccctctctccctctctcttt
ctccctggctggacagagagcacggggggagaagaagagggcttcttggtcaaaatggat
cccaacaaggaggccaacaacggcagtgagaaagagaaggaaaaagagaaagtggtcaag
aggagaaccaggcctaacttcctgcgctacatgcacttggagaggaggaagacggacacc
atcgtggtggccaacgatgacaccgccgccgacattaaaggtgacatcaaccttgggacc
ctggtgcggaggagtcagtcggacaaaacggagtacagtgccaaacttaaagagaaaatg
gcgcccctgtcccccctgtcgtcgatcctggcctccccggccctcgaccccgcggaggtc
cgcctgaggaagatgagccgcaggtcaaaggtcatccaggagctggtgcagacggagagg
gacttcctcaccgacctggagctctgcatcagagaggtggtcaagcccctcagagacaga
caggtggtggacgtggatcgtctgtttactaacatggagacagtgtgtgaggtgtcggcc
gcgctgctccaccggctgcaggaggccacagctgagccagaccctgaggcactagtcata
ggggaagtgttcattcaggccaaagcagcgctggaggacgtctataaaatctactgctat
caccacgacgatgccaactctttactcaagtcctatgagaaagaggaaggaatcaagcaa
catttcatcacctgtgtgttatcactgaagcggatatacgaccaagaggggaaacccaac
ctgctggacatgggttctctgctcatcaagccggtccagcgggtcatgaagtaccctctg
ctgctcggggagctgtggcaggccacgcccagcgaccaccctgacaacaggcccctccag
gaggctctgaccgccgccaagatcatcaacgtcaacatcaacgagttcaagaggaggaag
gacatcgtgatgaagtacaagaggaccgaggaggatggggggacactcatgggtaaactg
aacaagttcagcatccactctatcaggaagaagtctgacaggctcacaggatacctcaag
atcctcacaggtgtggagccacaggtgagagatgaggtgttcgacaaggaggagaagctg
ttcaggagtctggagaaagcagtgagacaactagtcaagaacgtccattgttacctgata
cacatacaggagatggtaggtgtcgcggtccagaatgctgcagacctggaggacatcatg
aaggatccagacaaaatagacacaaacagtactcagcacatgaagaacggcaacaaccca
tacaagcactttaaagagaggatggcacatctggtcctggcacccctctcctctctccaa
ggcatgttcgctgccccgcagaaactcatccagaaacgctacgacaaactattggactac
tgcagccgcctggagcgctctccctcctcctccacgtcttctgcctcttcttcttcctcc
tctccatcacctgtatccgaggaccagggccaggttgctgcgcggcgggactacgcagcc
ctcaatgctcagctggtggaggagctgcagagattcaacatggccgcccatactattttg
tccaactgtgtcctctgcctggtgaccctgctgaaaggtctgatggacacggcctgccac
cacgcaccctccatacagcaactaccggctcctttgtccaacatcagtgaagtccaaagc
agcatcatggaagagctcaacaacctgactgtcgtcaaggacaacgcacagactctaata
gaacgcaaagtcagcttcgagaaaacaaagaaaattttagctgtcccagagatccagcgt
cagacagagggcaacagggccaggctgctggacgagtatccagctgacaggctgttccag
ctgaagaggaactgtaacgggtgtcaggagcaggatgtcagcctgctggagggggagctg
gtgggcctgctggaggacacagatcccctggggagccggggccgctggctggttgacacg
ggcagtacccagggttacgtgtactcatccttcctgaagcagtacaaccccaacagggat
catggtcgaccaggtcagggtacgggtacggggatcacagagccccagcagcccattgtg
gtgctggacgaggactttgacaacctcagcctgtttgtgtcgggcagcgggaggaacaac
agcatacggagccggagcagcatacctaacttcagcctctacaacacctccagtacctcg
cttgacagatgctccaccccgtccagcctacagggcgacacagagccagacatccaccag
gatttggacacagagccagacaaccagcagttttatgcggtgtacgggttccaggcacgc
tgcgaccaggagctgaccatgcaggagaaccagcatgtgaggatcctcaagttcagcgac
ctgggaggcaacaaggactggtggttggctgaggccaacggacagaagggctacgtccca
gccaactacctcggcaaaatgtcatacgcataa
DBGET
integrated database retrieval system
