Oncorhynchus mykiss (rainbow trout): 118941531
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Entry
118941531 CDS
T07259
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118941531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
118941531
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
118941531
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
118941531
NCBI-ProteinID:
XP_036811352
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All DBs
Position
19:1830544..1849336
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AA seq
558 aa
AA seq
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MVLNIPGVVAMAVFYLLVLGTGLWAARKSRAMEKKSTGDKTEITLLGDRNIGLLVGIFTM
TATWVGGGFIVGIAEVVYNPNLGLVWAFMPLQSSVSFIIGGIFFAKPMREKKYVTMMDPF
QIKYGRVVSGALVFPALVMDALWVACTLVGLGGTMSVILDLPYSYSVGISAVVAIIYTLL
GGLYSVAYTDVIQLILIFFSLFGLFCLCCQWLCVPFLMANPVVGDITQTAFNHTHQAPWL
GHMEKGKVFKWVDDFLLVALGSLSFQCFHQRTLSASSSFNAQVTCFAAAAMVLILGIPSV
LVGAVAASTDWNLTSYGSPSPYERNETGLVLPIALQHLAPPYVSVIGIGAIAAAVMSSVD
SGLLSSASMFSSNIYKNIIRKQASDREIQWVIRVSVVVVGLCGMALTLLHNSTYALWILA
SDLSYTIIFPQLICVLFFQVSNGYGAVVGYLVGGLMRLLCGEPIFNLAPVLHFPGCTLED
GVYVQRSPIRTICMLLALAAILGFSWLAQLMFNKVWLPERWDVFQVKFQTLPLGGAREMK
EKEEDGAVSEPMLDTTKC
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaacattccaggtgtggttgccatggcagtgttctatctgctggtcctgggg
acaggtttgtgggcagcacggaagtccagggctatggagaagaaaagtacgggagacaag
acagagataaccttactgggagacaggaatatcggcctgcttgtgggaatattcaccatg
actgctacgtgggttggaggaggctttatcgtagggatagcagaggttgtctataaccct
aacctgggtctggtctgggctttcatgcccctacagagctccgtctccttcatcatcggt
ggtatattctttgccaagccgatgagggagaagaagtatgttactatgatggatcccttc
cagatcaagtatgggagagtagtgagtggagctctggtgttccctgcccttgtaatggat
gcactgtgggtcgcctgcacactcgtcggactaggtggcaccatgagtgtaattttggac
ctgccctactcttactctgtggggatttctgcagtggtggccatcatctacactctactg
ggaggactctactctgtagcctacaccgacgtcatccagctcatcctcatcttcttcagt
ctgtttgggcttttctgtctctgctgccagtggctgtgtgtcccgttcctcatggccaac
ccagtggtgggtgacatcacccagacagctttcaaccacacccaccaggccccctggctg
ggacacatggagaaggggaaggtcttcaagtgggttgatgacttcttattggtggcgttg
ggtagcttgtctttccagtgtttccaccagaggacgctttctgcctcctcctcgtttaac
gcccaggtcacctgcttcgcggctgctgccatggtcctcatcctggggatcccctctgtc
ctggtcggggctgtagccgcttccacagactggaacctgacatcgtacgggtctccgtct
ccgtatgagcgcaacgagacgggattggtgctccccatcgccctgcagcacctggctccg
ccctacgtgtccgtcatcggcatcggggccatcgccgccgcagtgatgtcatccgtggac
tctggcctgctcagctccgcctccatgttctcctccaacatctacaagaacatcattcgg
aagcaggcctcagacagggagatacagtgggtgatccgtgtgtcggtggtggtggtgggg
ctgtgtgggatggccctcactctcctccacaacagtacctatgccctgtggatcctggcg
tctgatctctcctacaccatcatcttccctcagctcatctgcgtcctcttcttccaggtc
tccaacggctatggagccgtggtgggatacctcgtagggggcctgatgagactcctctgt
ggggagcccatcttcaacctcgcccctgtcctccacttccctggatgcaccctggaggac
ggcgtctatgtccagcgctcccccatcaggaccatatgtatgcttctggccctggcggcc
atcttgggtttctcctggctggctcagctgatgttcaataaggtctggttgcccgagagg
tgggatgtgttccaggtgaagttccagactttgccacttggtggcgccagagagatgaaa
gagaaggaggaggatggtgcagtctctgagcccatgcttgacaccacaaagtgttaa
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