Oncorhynchus mykiss (rainbow trout): 118943990
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Entry
118943990 CDS
T07259
Name
(RefSeq) nectin-1-like isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266
Virion - Herpesvirus
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04520
Adherens junction
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
118943990
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118943990
04517 IgSF CAM signaling
118943990
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118943990
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118943990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
118943990
04090 CD molecules [BR:
omy04090
]
118943990
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Nectin family
118943990
CD molecules [BR:
omy04090
]
Proteins
118943990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
I-set
ig
Ig_PVRIG
FAM183
Syndecan
C2-set_3
Insulin_TMD
TM_ErbB1
EACC1
YajC
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
118943990
NCBI-ProteinID:
XP_036816952
LinkDB
All DBs
Position
24:complement(44326788..44898432)
Genome browser
AA seq
527 aa
AA seq
DB search
MAMLATVWIVLLAVNIQAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQK
FLNGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPLTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVI
KWDTRLKGEATFQETQNSNGTVTVRSNYVVVPSRETHKQKLTCIVTYRNERITDSVVLNV
QYEPEVKIEGFDGNWYLNRQDVSLTCNTDANPPVTVYQWKLLNGSLPSTVEIRNNSLIFK
GAVTYELAGTYVCDATNGIGTRTGLVEVNVTEKPMARGPPGGILGVLGGVVAAGLIIAVA
VTVFMVYRRQQKTRTETDNDLTDLPPAHKPAPPPPKKKSSDLKGHLTSDDIQVVHLDKGE
DMQKLPLQPPYYDMAPSESTPFTDKPNCGRHELSNPAEHVSYHRVYNKEHCLESQPTQAY
PPPVTFLPQNPYTHPPSNNPLYPASYPAQGQGQGEAPRPLFPKEQSV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttggcgactgtttggatagtccttctggctgtcaatatacaagctggagat
ggacagagtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagctg
cggtgtatcttcgttaattccaaccctccagtcaagatctctcaggtgacgtggcagaag
ttcctgaacggcaccaaacagaacgtggccatcgccaacccgtcgctgggggtgtccgtg
ctcccgcccttcaaggagagggtgaccttcaagcaggctgcggtccgccaccgcaccccg
tctctggaggataccaccatcatgttctccaacctgaggctgtctgatgaggccgcatac
atctgcgagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcaccgtg
tttgcgcgacctctgacccgaatgaccttgaccacgcctaccatcgtggcccgcccccag
aagcgtaagatgactgtggcaacatgcctctcggccaatgggaagcctcagagcgtgatc
aagtgggacacgaggctgaagggtgaggccacgttccaggagacgcagaacagcaacggc
acggtgaccgtccgcagtaactatgtggtcgtgccaagcagagagacacacaaacagaaa
ctcacctgcatcgtaacctaccgcaacgagaggattaccgacagtgtcgtgctcaacgtg
cagtatgaaccggaggtgaagatcgagggttttgatggtaactggtacctgaaccgtcag
gacgtcagcctcacctgcaacactgacgctaacccccctgtcaccgtctaccagtggaaa
ctgttgaatggatctcttcccagcaccgtggagattcgtaacaactctctaatcttcaag
ggggcggtgacctacgagctagctggaacatacgtgtgtgatgccaccaatgggatcggg
actcgtacaggtctggtcgaggttaacgtcactgagaagccgatggcccggggtcctcct
ggaggaatattgggggtgttgggaggggtcgtagccgctggtctcatcatcgccgtggct
gtcacagtcttcatggtttaccgccggcagcagaagactcgcaccgagactgacaatgac
ctgaccgacctcccgcccgcccacaagccggcccctcccccgcccaaaaagaagagcagc
gatttgaagggccacttgacatccgatgacatccaggtggttcatctggacaagggcgag
gacatgcagaagcttcctctccagcctccctactacgatatggcgccctccgagtcaacc
cctttcactgacaagccgaactgtgggagacacgaactatcaaacccggctgaacatgtg
agctaccatcgagtctacaacaaggaacactgtctcgagtcacaaccaactcaggcctac
ccccctcccgttaccttcttaccccaaaatccctacacacatcctccgtccaacaacccc
ctgtaccccgccagctaccctgcccaaggccaagggcagggcgaggctccacgacccctc
ttccctaaggagcagtccgtgtga
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integrated database retrieval system