Oncorhynchus mykiss (rainbow trout): 118944880
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Entry
118944880 CDS
T07259
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118944880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
118944880
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118944880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
118944880
NCBI-ProteinID:
XP_036822960
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All DBs
Position
3:complement(6354095..6377182)
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AA seq
934 aa
AA seq
DB search
MRRSGAPSQVFGNMAKKPRFVPPGASLAGRPDPPVGTLLEPEPLAPKLSTGNVLYKIQRS
LSAPAPPLALPVKAFSLAKSSPQAPGLSRALARVLGAADSKKNELEPEDPFFTEENTGDP
ADFRCSSQSPAGGCGPVGVGAGSGSGAGSDGPRYFSVMWCKASGRKHKRWQGDAVLVTRG
RTATLKDMEGKDIGKGSGYKVSELASLGEGETLMIGAKQVEVMGLVSELNYNKGRCFLDV
HVEKEEPKISAPPPSQRPASKPFCRPTLLGGETDRGVAKPQEEGPCKPRHDPLAPGAIVM
PRPSTNHQWAYNKAGLPLVDVVVDPYLTTHLRPHQRDGLLFLYECVMGMRATCRYGAILA
DEMGLGKTLQSVALTWTLLKQGPYGGKPVAKLVLVVSPGSLVQNWGAEFKKWLGCERINV
YTVNQDQRVELFAASTLHSVLVISYEMLLRSLEVVQKLEFGLVICDEGHRLKNSSIKTSS
ALSGLSCTRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSAAYRKVYEEPILRSRQPICT
EEERVLGEERAAELSRLTGLFILRRTQEIINRYLPPRLDWTVFCSPSSLQRELYQVLLSH
RVIRACLQGSTQTHTHLACITALKKLCNHPGLLYSTVQERSDGSSAEGSLYEGLRGVFPE
SYSSGGFSTADSGKLLVLSDLLTTIHHLSPTDRVVLVSNYTQTLDLLQDLCVHLGYTYCR
LDGNTPTIQRQRLVDNFNSPHSAHFLFLLSSKAGGLGLNLIGASHLVLYDIDWNPANDIQ
AMSRVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSNEL
RDLFSLTDTPCLTHELLHCSCKEGEDEAPASDRPCQLGRQGDRGGARQKHLSMSELIQWR
HFAGDTHTFRDAYLDHARTHISFAFQSTISHITQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctcaggggcccccagccaggtctttggtaacatggcgaagaagccccggttc
gtccctcctggagcctcactggctggtcgtcctgatccccctgtgggtactctgcttgaa
ccggagcctctggcccctaaactctccacagggaacgtgctctacaagatccagaggagc
ctctcagcccctgcaccgccccttgccctgcctgtgaaggccttcagcctggctaagagc
agcccccaagccccaggcctgtccagagctctagccagggtgctaggtgcagcagacagt
aagaagaatgagctagagcctgaagaccctttctttactgaggagaacactggagaccca
gctgatttcagatgttcctcacagagtccggcaggaggctgtggtccagttggggtcggg
gcagggtctggtagcggtgctggttctgacgggccgcggtacttcagtgtgatgtggtgt
aaagccagtgggaggaaacacaaacgctggcagggagacgctgtcctggtgacacgaggg
cgtaccgccacgcttaaagacatggagggcaaggacatcggcaagggtagtggctataag
gtatcagagctggcatcgctgggtgaaggagagaccttgatgataggagctaaacaggtg
gaggtgatgggactcgtatcagagctgaactacaataagggccgctgtttccttgacgtc
catgtggagaaggaggagcctaagatatcagctcctcccccctcacaacgcccagcttcc
aaaccgttctgccgtccgacgctattgggcggagagactgataggggagtggccaagcct
caggaggaggggccctgtaaaccacgccatgaccctctagcaccaggagccattgtcatg
ccccggccctcaaccaatcaccagtgggcgtataacaaggcaggcctcccactggtggat
gtggtggttgacccctacttgaccactcacctccgaccccaccagcgagacggcctgctg
ttcctctacgagtgtgtcatggggatgagggctacatgtaggtacggtgctatcctggca
gatgagatgggtctgggtaagaccctccagagcgtggctttgacatggacgctgctaaag
cagggcccatacggcgggaagccggttgctaagcttgtgctggtggtttcccctggcagc
ctggtgcagaactggggggcggagtttaagaagtggcttggctgtgagaggatcaacgtc
tacactgttaaccaggaccagagggtggagctgtttgcagcgtctactctccacagtgta
ttagtgatcagctatgagatgctgcttcgctctctggaagtggtacagaagctggagttt
gggctggtgatctgtgatgagggtcacaggttgaagaacagcagcatcaagacttcctct
gccctcagcggtctcagctgtacacgcagagttattctgacaggtactcctgtccagaat
gacctgcaggagttctatgccatcatagagtttgtgaacccgggaattctggggtcgtct
gctgcctacaggaaggtgtacgaggagccaatcctccgctcccgacagcccatctgcact
gaggaggagagagttttgggggaggagcgagcggctgagctctctcgtctgactggtctg
tttattctgaggcggacccaagagatcatcaaccgctacctgccacctcgtcttgattgg
acagtgttctgtagcccctcctccttgcagcgggagctgtaccaggttctcctctcgcac
cgtgtcatccgagcctgtctacaggggtcgacacagactcacacacacctcgcctgcatc
accgccctgaaaaagctctgcaaccacccaggactgctctactccactgtacaggagcgt
tctgatggcagctcagcagagggttctctgtatgaagggctaagaggtgtctttccagag
tcttactcttctgggggcttcagtacagctgactcagggaaattactggtcctgtctgac
cttctgaccactattcaccacctcagccctactgacagggtggtgttggtgtccaactac
actcagacgttagacctactccaggacctgtgtgtccacctgggctacacctactgtcgc
ctggacggcaacacccccaccatccagaggcagcgattggtggacaacttcaacagccct
cactccgcccacttcctcttcctcctgagttctaaagccggagggttggggcttaacctg
atcggcgcctcccacctggtcctatacgacatcgactggaaccctgccaacgatatacag
gcaatgtcacgagtgtggagagacggacagaagaagactgttcacatctaccgcctgctc
actgcaggtaccatagaggagcgtatcttccagaggcaggtgtccaaacaggggctttct
gggacagtggtggacttggggaaaggggcggagcacaccagcttctcctccaatgagctg
cgagatctcttcagtctgacggacacaccctgtctcactcacgagctgctacactgcagc
tgcaaagaaggagaggatgaggcgcctgcgtctgataggccgtgccagctgggtcgtcaa
ggtgaccgtggtggggcaaggcagaagcatctgagcatgtcagagctgatacagtggaga
cacttcgcaggggacacacacaccttcagagatgcttacctggaccatgcacgaacccac
atctccttcgccttccagtccaccatctcacacatcactcagtaa
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