Oncorhynchus mykiss (rainbow trout): 118946056
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Entry
118946056 CDS
T07259
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
omy04261
Adrenergic signaling in cardiomyocytes
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118946056
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118946056
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
118946056
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
118946056
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
118946056
03036 Chromosome and associated proteins [BR:
omy03036
]
118946056
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118946056
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118946056
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118946056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
118946056
NCBI-ProteinID:
XP_036826181
UniProt:
A0A8C7SMW9
LinkDB
All DBs
Position
31:12908624..12967734
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPTTILSSTCHTEADVISTVEFNPSGELLATGDKGGRVVVFQREQET
KSEPQRRGEYNVYSTFQSHDPEFDYLKSLEVEEKINKIRWLPQQNAAYFLLSTNDKTVKL
WKIRERDRRPEGYNLKDEDGRIRHPSTITSLRVPVLQNADLMVEATARRVFSNAHTYHIN
SISVNSDFQTYISTDDLRVNLWNLEITDQSFNIVDIKPCNMEDLTEVITAAEFHPQQCNT
LAYSSSRGSIRLCDMRKQALCDTHCKFFEEPEDPSTRSFFSEIISSISDIKFSHSGRFLM
TRDYLTVKVWDLNMETRPVQTYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKKDVTLEASRENSKPRAILKPRKVCVGGKRRKDEVTVDSLDFSKKILH
STWHPQENIIAVAASNNLYIFQDKVT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttatctcccgtacctcttccgccctcccaccaccatcctatct
tccacatgccacaccgaagctgacgtcatctccacggtggagtttaatccttcgggggag
ctgttggccacaggggacaaaggaggaagagtggtggtcttccagagagaacaggagact
aaaagcgagccccagaggcgaggggagtataatgtgtacagtacgttccagagtcatgat
ccagagtttgactacctgaagagtctggaagtagaggagaagatcaacaagatcagatgg
ctgccacagcagaacgccgcctacttcctcctctccaccaacgataagacagtgaagctc
tggaagattcgtgagagagacagacgaccggagggatacaacctgaaggatgaagacgga
cgaatcagacacccatccacaatcacctcactacgggtgcctgtcctccagaacgctgat
ctgatggttgaggcaacagcgcggcgtgtgttcagtaacgcccacacctaccacattaac
tccatctccgtgaactccgacttccagacctacatctccacggatgacctcagggtcaac
ctgtggaacctggagatcactgaccagagcttcaacatcgtggacattaagccgtgtaac
atggaggatctgacggaggtgattacagcagcggagtttcatcctcagcagtgtaacacc
ttggcttacagcagcagtagagggtcaatacgactctgtgacatgaggaaacaggcgctc
tgcgacacacactgcaagttctttgaggagccagaggacccctccactcgttcatttttc
tcagagatcatctcttccatctcagacatcaagtttagtcacagcgggcgcttcttgatg
acacgggactacctgacggtcaaggtgtgggacctcaacatggagaccagaccggtccag
acataccaggtccatgactacctgaggggtaagctgtgttctctgtacgagaacgactgc
atcttcgacaagtttgagtgtgtctggaacgggtcagacagtgtcattatgacggggtca
tataataatttcttccggatgtttgatcggaacaccaagaaagatgtgactctggaggct
tccagagagaacagcaaaccccgggccatcctcaaaccacgcaaggtgtgtgtgggaggg
aagcgtcgtaaagacgaggtgactgttgacagtctggacttcagtaagaaaatcctccac
tccacctggcacccacaggaaaacatcatcgccgtggcagccagtaacaacctttacatc
ttccaggacaaggtcacctag
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