Oncorhynchus nerka (sockeye salmon): 115101015
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Entry
115101015 CDS
T07952
Name
(RefSeq) nucleolysin TIA-1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115101015
03041 Spliceosome [BR:
one03041
]
115101015
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115101015
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115101015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
115101015
NCBI-ProteinID:
XP_029476019
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All DBs
Position
LG19:7672134..7691450
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AA seq
390 aa
AA seq
DB search
MMDDEQPKTLYVGNLSRDVTEALVMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
AASLAAMNGRKIMSKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTAGLTEQLMRQTFTPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIEGHVVKCYWGKETTDMVSPMQQVQVPQLTPQPNKIG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVGAVS
NGGVVEPGQGVNGAMLANQSVMGTAGYHTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaacaacccaagaccctgtatgtgggaaacctgtcccgggatgtgacc
gaagccctcgtcatgcagctgttcggacagatcggaccctgcaagagctgtaaaatgata
gtagatacggcaggtaatgacccctactgctttgtggagttctacgaacacaggcacgct
gccgcgtcactcgcagccatgaacggtcgtaaaataatgagtaaggaggtcaaagtgaac
tgggccacaacccctagcagccagaagaaagacacaagcaatcacttccacgttttcgtc
ggagacctcagtcctgaaatcaccacggatgacatcaaagctgcctttgccccctttggg
aggatatctgatgcccgggtggtgaaagacatggctactggcaaatctaaaggctatggc
tttgtgtccttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggctgggaggacggcagatcaggaccaactgggccaccaggaagccccctgcacccaaa
gccacctacgagacgaacacaaagcacctgtcgtttgaggaggtagtgaaccagtccagc
cccagcaactgtaccgtctactgtggaggagtcactgcagggcttacagaacaactgatg
aggcagaccttcacccccttcggtcaaatcatggagatcagagttttcccagacaaaggc
tactcgtttgtgaggttcaactcccacgagggagcggcccacgccatagtgtcagtgaac
gggacgtccatagagggccacgtggtgaagtgttactgggggaaggagaccacagacatg
gtcagccccatgcagcaggtacaggtgcctcagctcacaccgcagccgaacaaaattggc
tttgcagcgcagccctacggccagtatgcccagtggtacggtaatgcccagcagattggc
caatacgtgcccaacgggtggcaggtgccgacctacggagtctacggacaggcctggaac
cagcagggcttcaatcatttacaggcgggtgcagggtggacgggcgttggagcggtcagt
aatggcggcgtggtggagcctggacagggagtcaacggggcgatgctggccaaccagtcg
gtcatgggcaccgctggctaccacacccactga
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