KEGG   Oncorhynchus nerka (sockeye salmon): 115101029
Entry
115101029         CDS       T07952                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04137  Mitophagy - animal
one04140  Autophagy - animal
one04144  Endocytosis
one04145  Phagosome
one04148  Efferocytosis
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115101029
   04145 Phagosome
    115101029
   04140 Autophagy - animal
    115101029
   04137 Mitophagy - animal
    115101029
   04148 Efferocytosis
    115101029
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115101029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115101029
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115101029
   04031 GTP-binding proteins [BR:one04031]
    115101029
Membrane trafficking [BR:one04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    115101029
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115101029
  Exosomal proteins of other body fluids (saliva and urine)
   115101029
  Exosomal proteins of colorectal cancer cells
   115101029
  Exosomal proteins of bladder cancer cells
   115101029
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    115101029
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW PduV-EutP ATP_bind_1 nSTAND3 AAA_16 Septin NTPase_1 AAA_7 AAA_22 AAA_24 DUF5992 G-alpha AAA_5 SRPRB ATPase_2 NB-ARC NACHT AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 115101029
NCBI-ProteinID: XP_029476039
EnsemblRapid: ENSONEG00000029136
LinkDB
Position
LG19:complement(8529148..8538302)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVEQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPADPSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacttctctgatgaaccagtatgtaaataagaagttcagtaaccagtacaaggccact
ataggagcggacttcctcaccaaggaggtgatggtggatgacaggctggtcaccatgcag
atctgggacacggcggggcaggagcgtttccagtctctgggcgtggcgttctaccgcggc
gctgactgctgtgtgctggtctacgatgtcacggcgcccaacaccttcaagacactggac
agctggagggatgagttcctgatccaggccagccccagagacccagataacttccccttt
gtggtgctaggcaacaagattgacctggagaacagacaggtgacgacaaaacgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgccaaggaggccatc
aacgtagaacaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaccagatcaaactgagagacgaccggcccgccgaccccagc
gacggctgctcctgctga

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