Oncorhynchus nerka (sockeye salmon): 115101048
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Entry
115101048 CDS
T07952
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115101048
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115101048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_HPS5
WD40_RFWD3
eIF2A
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
115101048
NCBI-ProteinID:
XP_029476076
LinkDB
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Position
LG3:complement(816428..823041)
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AA seq
451 aa
AA seq
DB search
MSAHRKDMLPNEDGEMEEMEGGGSDEDEMEEEGKDGEQETQVYVPGKQPLQPGEELEMDR
SAYRMYHECQTGAPCLSFDVLRDANGDGREQYPLSMLLCAGTQADAALSNRLLLIRMHNL
HGTTEKVKEGDESSDGESDEEDDDEDKKPQMELAMMPHYGGINRVRVTHHGDQSLAAVWS
EKGQVEIFDLRSQMEAVYSSAAMSTFVKQQKEATPLFSFSGHMTEGFAIDWSPKVPGRLV
SGDCKKNIHVWEPQEGGTSWQIDQRPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWD
TRAPPNSMLCAKEAHSSDVNVISWNRTEPFLLSGGDDGLLKVWDLRQFQSGRPVANFKQH
SAPVTSVEWNPVDSSVFAASGADDVVSQWDLSVESCDVGAREEGVKDLPPQLLFLHQGQT
DVKEIHWHPQIPGVMVSTALSGFNVFRTISV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcacagaaaagacatgcttccgaacgaagatggagagatggaggaaatggaa
gggggtggcagcgacgaagacgaaatggaagaagagggaaaggatggagaacaggaaact
caagtttatgtccccggaaaacagcctctccaacccggagaggagctcgagatggaccgg
tcggcttaccgcatgtaccacgagtgtcagacaggtgctccttgcctgagcttcgacgtg
ttgagagatgcgaatggagacggcagggaacagtatcccctctctatgctgctctgtgca
ggcacacaggctgacgctgccctcagcaacagactgcttctcattcgcatgcacaacctc
cacggtactacagagaaagtgaaggagggggacgagagcagtgatggagagagtgatgaa
gaggatgatgatgaagataagaagccacagatggagttggccatgatgcctcactacgga
gggatcaacagagtccgagtgacccatcatggagatcagtcattggctgctgtctggtca
gagaaaggtcaggtagagatatttgacctccgatcccagatggaagccgtctacagttca
gctgccatgtcaacctttgtcaaacagcagaaggaagccacgcccctcttcagtttctcg
ggtcacatgactgagggctttgccattgattggtcgcccaaagtacccggtcggctggtc
agtggcgactgcaaaaagaacatccatgtgtgggaaccacaggagggagggacttcatgg
cagatcgaccaacggcctttcagttctcacaccaagtccgtggaggacctgcagtggtca
cccacagaagccacggtttttgcttcgtgctctgtggatcagtccatccgcgtctgggac
accagagccccgcccaactccatgctctgtgccaaggaggcacactcctcagacgtcaac
gtcatcagttggaacaggactgaaccattcctcctgtccggcggggacgacggacttctg
aaagtttgggacttgaggcagttccagtcgggccggccggtggctaacttcaagcagcac
agcgcgccagtgacatcagtagaatggaaccctgtggactccagcgtgttcgccgcctct
ggagcggacgacgtggtcagccaatgggacctatcggtagagtcatgtgatgtgggtgcg
agggaggagggggtgaaggacctgcccccccagctgctgttcctgcaccagggtcagaca
gacgtcaaggaaatccattggcacccgcagatacccggggtgatggtctctactgctctg
tcaggcttcaacgtgttcaggaccatctctgtatag
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