KEGG   Oncorhynchus nerka (sockeye salmon): 115101058
Entry
115101058         CDS       T07952                                 
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K04551  ubiquitin B
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04120  Ubiquitin mediated proteolysis
one04137  Mitophagy - animal
one04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115101058
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115101058
   04137 Mitophagy - animal
    115101058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115101058
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115101058
Ubiquitin system [BR:one04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   115101058
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   115101058
  Exosomal proteins of other body fluids (saliva and urine)
   115101058
  Exosomal proteins of colorectal cancer cells
   115101058
  Exosomal proteins of bladder cancer cells
   115101058
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 115101058
NCBI-ProteinID: XP_029476086
LinkDB
Position
LG19:9459471..9461525
AA seq 305 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGN
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacacttaccggcaagaccatcaccctagaggtcgagcccagt
gacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatcccccctgaccag
cagcgcttgatcttcgctggtaagcagctggaagatggtcgcacactctccgactacaac
atccagaaggagtctaccctccatcttgtgctccgtctgaggggaggtatgcagatcttc
gtgaagacccttaccggcaagaccatcaccctggaggttgagcccagtgacaccatcgag
aacgtcaaggccaagatccaggacaaggagggaatccccccagaccagcagcgattgatc
ttcgctggcaagcagctggaagatggtcgcactctctccgactacaacatccagaaggag
tccaccctccatcttgtgctccgtctgaggggaggtatgcagatctttgtgaagaccctt
accggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaacgtcaaggcc
aagatccaggacaaggagggaatccccccagaccagcagcgcttgatcttcgctggtaag
cagctggaagatggtcgcacactctccgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctgaggggaggtatgcagatctttgtgaagacccttaccggcaagacc
atcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggccaagatccaggac
aaggagggaatccccccagaccagcagcgcttgatcttcgctggcaagcagctggaagat
ggtcgcactctctccgactacaacatccagaaggagtccactcttcacctggtcctgcgt
ctccgtggtggcaactaa

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