Oncorhynchus nerka (sockeye salmon): 115101098
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Entry
115101098 CDS
T07952
Name
(RefSeq) beta-hexosaminidase subunit beta-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00511
Other glycan degradation
one00513
Various types of N-glycan biosynthesis
one00520
Amino sugar and nucleotide sugar metabolism
one00531
Glycosaminoglycan degradation
one00600
Sphingolipid metabolism
one00603
Glycosphingolipid biosynthesis - globo and isoglobo series
one00604
Glycosphingolipid biosynthesis - ganglio series
one01100
Metabolic pathways
one04142
Lysosome
Module
one_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115101098
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
115101098
00513 Various types of N-glycan biosynthesis
115101098
00531 Glycosaminoglycan degradation
115101098
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
115101098
00604 Glycosphingolipid biosynthesis - ganglio series
115101098
00511 Other glycan degradation
115101098
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115101098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
one03110
]
115101098
Enzymes [BR:
one01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
115101098
Chaperones and folding catalysts [BR:
one03110
]
Intramolecular chaperones
Others
115101098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
115101098
NCBI-ProteinID:
XP_029476148
LinkDB
All DBs
Position
LG19:complement(12816862..12827302)
Genome browser
AA seq
546 aa
AA seq
DB search
MIATLKFITLLLAVVVCRATQDYGYKDVEEPTLGDSQYGSLWPLPQKVQMSTVAFKLSGV
SFQIVDAKESSSGASCSLLQNAYRRYDEYIFPISRMQGQNKKAFASDVSELQVWITSADS
ECDSYPSVTSDESYELSVDSPVAVLKAPKVWGALRGLETFSQLVYEDEYGAKSINRTEIQ
DFPRFTHRGLLLDSSRHFLPIKVILANLEAMAWNKFNVFHWHIVDDPSFPYMSRTFPQLS
QQGAYHPYTHVYTPSDVKMIIEFARLRGIRVVSEFDTPGHTQSWGKGQKDLLTPCYSGAS
PSGSFGPVNPILNTTYDFMAMFFKEVSAVFPDAYIHLGGDEVDFSCWKSNPDIQKFMVQQ
GFGTDYSKLESFYIQRLLDIVTTTNKGYMIWQEVIDNGVKLKADTLIHVWKGNQQQYQAE
MARVTASGYQALLSTPWYLNRISYGQDWQAAYKADPQDFNGTDAQKKLVVGGEACLWGEY
VDATNLTPRLWPRASAVGERLWSDKDVKDTNDAYSRLIQHRCRMVQRGIPAEPLFTGYCA
HEYKGV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgacgctgaagtttataacattattacttgctgttgttgtctgccgggcaacg
caagattatggttataaagatgtcgaggagcctaccctgggcgattctcagtatggatct
ctctggccgttgcctcagaaagtccaaatgtcaacggtagcattcaaactcagcggtgtt
agtttccagatagttgacgcgaaagaatcgtcttccggcgcgagctgcagccttcttcaa
aatgcatatcgaaggtatgacgaatacatattccccatttccagaatgcaagggcaaaac
aaaaaggcatttgcctctgatgtgtctgagttacaggtgtggatcacatcagctgactct
gagtgtgacagctacccaagtgtgacatctgacgagtcatacgaactctcggtggactct
cctgttgctgtgctgaaagcacctaaggtgtggggcgcgctgagaggtctggagactttt
agccagttggtgtatgaggatgaatatggagcaaaaagcatcaataggacagagatccag
gactttccacggtttacacatcgaggcctcttattggacagctctcgtcacttcctgccc
atcaaagtcatcttagccaatctggaagcaatggcgtggaacaaattcaatgtgttccac
tggcacatagtagatgacccctccttcccctacatgagccgtaccttcccacagctgagc
cagcagggagcataccacccgtacacgcatgtgtacacgccctctgacgtgaagatgatc
attgagtttgctcgcctcaggggcattcgtgtcgtctctgagtttgacacccctggacac
actcagtcatggggcaaaggccagaaggacctactgaccccctgttactctggagccagc
ccctctggctcgtttggaccggtcaaccctatcctcaacaccacctatgacttcatggcc
atgttcttcaaggaggtcagcgcagtgttccccgatgcctacatccatctaggaggagac
gaagttgacttcagctgctggaagtccaacccagacatccagaagttcatggtgcagcaa
ggctttgggacggactacagcaagctggagtctttctatattcagaggctcttggatatt
gtcaccactaccaacaagggctacatgatctggcaggaggtgattgacaatggagttaag
ctgaaggcagacacgctaatccacgtgtggaaaggcaaccagcagcagtaccaggctgag
atggcaagggtcacagcatcaggctaccaggccctgctctccacaccctggtacctgaac
cgcatctcctacggccaagactggcaggccgcttacaaggcagacccacaggactttaat
ggcacagatgctcagaagaagctggtagtcggcggagaggcctgtctgtggggtgaatac
gtggacgctaccaacctgacccccagactctggccccgtgccagtgctgtgggggagcgg
ttgtggagtgacaaggatgtgaaagacacaaacgatgcttatagtcgtctgatccagcac
cgctgtcgcatggtccagcgtggtataccagctgagcctctgtttacaggttactgtgca
catgagtacaaaggggtatga
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integrated database retrieval system
