Oncorhynchus nerka (sockeye salmon): 115101101
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Entry
115101101 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115101101
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115101101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
115101101
NCBI-ProteinID:
XP_029476155
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All DBs
Position
LG19:complement(13116902..13161932)
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AA seq
1118 aa
AA seq
DB search
MMLTPLRLNRIEEEEWDKYNIPSKVASEKYKVIRTFSFLKSRMSSTRNKNKGKEKEREKE
ERDKDRQQNGHRFSTGSCAGPTVCLVCDKPATGKELLHCSSCTLMVHKGCNDFAPPCLNK
LVKNRTASLPQMRDSPSSCLIATSASLPMMSQRDRRETASLPNPLSSSVPSSTDSRLSES
PEVVSDRRWSPGRSEELLQTTESSSSTDSSLGEDCVDTGLHSDLAADALDYEAESWSLTV
EHKFCKKQDKRVVKRQDVIYELMQTEMHHLQTLCIMAEVFRRGMREEVQLDAGAVGRVFP
CLDELLLLHHDLFNSMRERRHSSAQPYGNRNYVIERIGDFLLQQFSEENAEKMKQVYGDF
CSHHTEAVAFFKELQQHNKRFQTFIKQQSNNYLVRRREIPECILLVTQRITKYPVLLERI
LQYTQEDSEEHRDLSRALVLIKEVIAAVDLRVSEFEQGQRLQDVLNRMDNRSAAKLKNGH
TFRKQDVLVPGRTLKHQGLLLWKTATGRLKDVLALLLTDTLIFLQEKDQKFIFAAVDQKP
PVISLQKLIVREVANEERGMFLISASAAGPEMYEVHTSSKDERNTWMRHIREAVESCPED
EEENTSESEEERRASEARAQKIQRLQENLSSQDHQICSTLEEKLQIYADLSAVRGGTQEQ
HPEPRLLVQPHPEEVPRAAVLLTAALREAENLRTTLSARTCSPSSLCSPHRDPLSHPVSS
ANPPTPMDNPTDGEASPGDPDTRDGEWSASQGLILQSLTQSHTGDTNNINLKVAQSVQSL
TQLLYSLQAAVTIQDSFYEVQKLLLRESDRSGPCPPRPHPPCLQEQEKYRNQEKRREEVA
AAVRLQGQLRQERQRWERECQLRHSQQGELESRLEERERQCHLEAERLKQEWEELEEQLG
EYQQSLERLREGQRSVGKERERLETQQKLLQSWRHSRQRSLPVMVIPLDGHQDSLPGQSG
VHLDNAGSVFVNEAAFTTSKVLNNRHMHHHIQQHQRGGTLRYGDDPRAHNSLNTILARSS
QRHTLHPDTNTPQCWAGGAGVTGYLYTTSGGQGTEHTPNDLNTHSYVRETWSSTATVPGQ
YQGAPHHGDHQLVLSSLVPLETESGDGEEGGEENIVYL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaccccattgcgtctgaacagaattgaagaagaggagtgggacaagtacaac
attccttccaaggtggcgtcagagaaatacaaagtgattcgtaccttcagcttcctcaag
agccggatgtcgagcacacgcaacaagaacaaggggaaggagaaggaaagggagaaggag
gagagagacaaggacaggcagcagaatggacatcgcttctccacggggtcctgtgctgga
cccacggtctgtctggtctgtgacaaacctgctactggcaaggaacttctgcactgctcc
agttgtacactcatggtccataagggttgtaatgactttgctcccccgtgtctaaacaaa
cttgtgaagaaccgaacggcatccctcccgcagatgcgagacagtccctcttcatgtctg
atcgccacctcagcctctctacctatgatgagccagagggacaggagggaaacagcctcc
ctccccaaccccctctccagtagcgtcccctcttccactgacagcaggcttagcgagagt
ccggaagtggtgtctgacaggagatggagtcctggccgatcagaggagctcctacagacc
acggagtcatcctcctccactgactcctccctcggagaagactgtgtggacaccggtctc
cacagcgacctggctgctgatgctctggactacgaggctgagtcttggagtctgacagtg
gaacacaagttttgtaagaagcaggacaaacgggtggtcaagagacaggacgtcatctat
gagttgatgcagacagagatgcaccacctccagactctgtgcatcatggctgaggtcttc
cggcgagggatgagggaggaggtccagctggatgcgggcgccgtggggcgtgtcttcccc
tgtttggacgaactcctcctcctccaccacgacctcttcaactccatgagggaacgccgc
cacagctccgcccagccatacgggaacaggaactacgtcatagaacgcatcggagacttt
ctgctgcaacagttttctgaagagaacgcagagaagatgaaacaggtgtatggagacttt
tgcagccatcacactgaggcagtcgccttcttcaaagagctacagcaacacaacaaacga
tttcagaccttcatcaagcaacaaagtaataactatttggtgcggaggagagagatccca
gaatgcatcttgttggtgacccagaggataactaagtaccctgttctgttggagaggatt
ctacagtacacccaggaggacagtgaggagcacagggacctctccagagctcttgttttg
atcaaggaggtgatcgcggctgtagacctgagggtcagtgagtttgagcagggtcagagg
ttacaggacgtcctaaaccggatggacaaccgtagtgctgccaaactgaagaacggacac
acctttaggaagcaggatgttctggtgccaggccggaccctcaaacaccagggcctgtta
ctgtggaagaccgccaccggacgactcaaagatgtcctggctctccttctcaccgacaca
ctgatcttcctacaggagaaagaccagaagttcatattcgctgctgtggaccagaagccc
ccagtaatctctctgcagaagctgattgtcagggaggtagccaatgaggagagagggatg
tttctgatcagtgcatcggccgcgggtccagagatgtacgaggtccacacctcctcgaaa
gacgaacgcaacacctggatgagacacatccgagaggctgtggagagctgtccagaggat
gaggaggagaacactagcgaatcagaggaggagagaagagcatctgaagccagagcccag
aagatacaaagactacaggagaacctgtccagtcaggaccatcagatatgttctactctg
gaggagaagctacagatctatgctgatctgtctgccgtgaggggcggcacccaggaacag
caccctgagccacgcttactggtccagccacacccagaggaggtgccccgggctgcagta
ctgctcactgccgcgctccgagaggctgagaacctgaggaccactctgtccgccaggacc
tgttctccctccagcctctgcagccctcacagggaccccctgtcccaccctgtgtcctca
gccaaccctcctacccccatggacaaccccacagacggcgaagcctcacctggggaccct
gataccagggacggagagtggtcagcctcccagggcctcatactacagtccctgactcaa
tcccacactggggacactaataatatcaaccttaaggtggctcagagtgtccagagcttg
acccagttactctacagtctgcaggcagcggtaaccatccaagacagtttctacgaggta
cagaagctcctcctccgtgaaagtgaccgctccggcccctgcccaccgaggccacacccc
ccgtgtctccaggagcaggagaagtatcgtaaccaggagaagcgccgtgaggaggtggcg
gcagcggtgcggttacagggtcagctgcgccaggagaggcagcggtgggagagggagtgc
cagctgcgccacagccaacagggggagctggagagcaggctagaggagagggagagacag
tgtcacctggaggctgaaaggctgaagcaggagtgggaagagctcgaagagcagctggga
gagtaccagcagagcctggagaggctgagggagggccagagaagcgtggggaaggagagg
gagaggctggagacccagcagaagctgctgcagagctggagacacagccgacagaggagc
ctgcctgtcatggtcataccgctggatggtcatcaggactcacttcctggtcagtccggc
gtccatcttgacaacgccggctcagtgtttgtcaacgaggcagcgttcaccacgtcgaag
gtgcttaataaccgccacatgcaccaccacatacagcagcaccagagaggtgggaccctg
aggtacggagatgaccctcgagcccacaacagcctgaacaccatactggcccgctccagc
cagagacacacgctccaccctgacacaaacacaccccagtgctgggcggggggtgccggt
gtcactgggtacctctacacaacctcaggtggacaggggacagagcacacacccaacgat
ctaaacacacacagctatgtgagggagacgtggtcctcgacggcaactgtgcctggacag
tatcagggtgcacctcaccatggcgaccaccaactggtcctctcctccttggtccccctg
gagacggagagtggggatggggaggaggggggagaggagaacattgtgtacctctga
DBGET
integrated database retrieval system
