Oncorhynchus nerka (sockeye salmon): 115101109
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Entry
115101109 CDS
T07952
Name
(RefSeq) electrogenic sodium bicarbonate cotransporter 1-like isoform X1
KO
K13575
solute carrier family 4 (sodium bicarbonate cotransporter), member 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115101109
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
115101109
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GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
PTS_EIIA_2
Motif
Other DBs
NCBI-GeneID:
115101109
NCBI-ProteinID:
XP_029476174
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Position
LG19:13715015..13783147
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AA seq
1147 aa
AA seq
DB search
MSTDKNKRVEDEAVLDRGASFVKHVCDEEEVEGHHTVYIGVHVPKSYQRRRRHRRKSSHK
ERKERPVENVEGDKTDGENADEAAPNILKPLISAAAERIRFILGEEDDGPPPPQLFTELD
ELLAVDGQEMEWKETARWIKFEEKVEKGGERWSKPHVATLSLHSLFELKTCIEKGTILLD
LEASTLPQVVELITDSQIEIGQLKAELKDQVMYTLLRKHRHQTKKSNLRSLADIGKTVSS
ASRLFSNQDQNARSPHEHPQPFPHSHPQSQSQFVPYATPLGSEEPIEEVQRSSSMQYISS
PATTHRNLTSNSLNDFSDQPDRDQLRNKFMKKLPRDAEASNVLVGEVDFLDTPFVAFVRL
QQAVMLGALTEVPVPTRFLFVLLGPKGKANSYHEIGRAIATLMSDEVFHDIAYKAKDRQD
LLAGIEEFLDEVIVLPPGEWDPDIRIEPPKSLPSSDKRKNQYNAGGGGDGPQMNGDTPGH
DGGQGGGGHGHVGEELMNTGKFCGGLILDIRRKLPFFASDFYDAIHIQSLSAILFIYLGT
VTNAITFGGLLGDATENMQGVLESFLGTAVTGAIFCLLAGQPLTILSSTGPVLVFERLLF
NFSKDNDFDYLEFRLWIGLWSAFFCLVLVATDASFLVQYFTRFTEEGFSSLISFIFIYDA
FKKMLKLAHYNPINADYDPNYVTTYDCRCMPLPDDGNVTGIYSDVSSWINDTDLPVNATW
ASLDKEQCVKYGGELIGPACGFVPDVTLMSFILFLGTYTCSMCLKKFKFSRFFPTTVRKL
ISDFAIILAIVIFCGVDALVGVDTPKLIVPTEFKPTSPNRGWFVPPFGGNPWWVYLAAAL
PALLVTILVFMDQQITAVIVNRKEHKLKKGAGYHLDLFWVAVLLIVCSFMGLPWYVAATV
ISIAHIDSLKMETQCSAPGEQPKFLGVREQRVTGVIVFVLTGLSVFMAPILKFIPMPVLY
GVFLYMGVASLNGVQFMDRLQLLLMPAKHQPDLIYLRHVPQRRIHLFTFIQALCLALLWV
LKSTVAAIIFPVMILALVAVRRAMDYIFSQHDLSYLDDVIPEKDKKKKEDEKRKKKQKKG
SIDSEIDFDPRRLSLTHTQHAEGYFKPTTVASLNPLKKAAPQIRIELEQEDKSFFWKKQA
QSSETSL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggataaaaacaaacgggtggaggatgaggcggtgttggacagaggtgcgtcc
ttcgtcaagcatgtctgtgatgaggaggaagtggaaggtcaccacactgtgtacatcggc
gtacacgtgcccaagagctaccagcggaggcggcgccaccgacgcaagtccagccacaag
gagaggaaggagaggccggtggagaacgtagagggggacaaaacggatggagagaatgct
gatgaggcagcgcccaacatcctcaaacctctcatctctgcagcagcagagaggatcagg
ttcatcctgggtgaggaggatgatggacccccgccccctcagctcttcactgagttggac
gaactgctggccgtcgatggacaggagatggagtggaaggagacagccaggtggataaag
tttgaggagaaggtggaaaagggaggcgagcgttggagtaagccccacgtggccaccctg
tcccttcacagtctgtttgagttgaagacctgtattgagaaaggcaccatcctgctggac
ctggaggcctccactctaccacaggtggttgagttgatcactgacagccagatcgagatt
ggtcagctgaaggccgagctgaaggatcaagtcatgtacacgttgctacgaaaacatcgt
caccagaccaagaagtccaacctgcgctctcttgccgacatcggcaagacggtgtccagt
gcaagcaggctgttttccaaccaagaccagaacgcacgcagtccccatgaacacccccag
cccttcccccactcccacccccagtcccagtcccaatttgtgccttatgcaaccccgctc
ggctctgaggaaccgatagaggaggtccaaaggagctccagcatgcaatacatcagtagc
ccagccacaacccatcggaacctgacctctaacagcctcaatgacttctctgaccaacca
gatcgagaccagctgaggaataagtttatgaagaagcttcctcgtgatgccgaggcatct
aacgtcctggtcggagaggtggacttccttgacacgcccttcgtggcgttcgtccgtctg
cagcaggctgtcatgttgggagctctgacagaggtccccgtccctaccaggtttttattc
gtgctgctggggcccaaaggaaaagccaattcttaccatgagatcggacgcgctatcgcc
accctcatgtctgatgaggtgttccatgacattgcctacaaggccaaggacagacaggac
ctgctggcgggcatcgaggagttcctggatgaggtcattgtcctacccccaggggagtgg
gaccctgacatcaggatagaaccccccaaatccctgccctcgtctgacaagaggaagaac
cagtataatgctgggggtggaggggatgggccccagatgaatggggacacaccaggacat
gacgggggtcagggaggagggggacatggacatgtcggagaagagctcatgaacactggg
aagttttgcggcggcctcattctggacatcaggcggaagctgccttttttcgccagtgat
ttctacgacgccattcacatccagtcgctgtccgccatcttattcatctacctgggcact
gtaaccaatgcaatcaccttcggagggttgctaggagacgctacggaaaacatgcagggt
gtgttggaaagtttcctgggcacggcagtgacaggggccatattctgtctgctggctggc
cagcctctcaccatcctcagcagcaccggtcctgtactggtgtttgaaaggctcctcttc
aacttcagcaaagacaatgactttgactacctggaattccggctgtggatcggcctatgg
tcagctttcttttgcctggtgctggttgccacagacgccagcttcctggtccagtacttc
acgcgcttcacggaggagggcttttcatccctcatctccttcatcttcatctatgatgcc
ttcaagaagatgctgaagctggcccactacaaccccattaatgctgattacgaccctaac
tacgtcacaacgtacgactgccgctgcatgcccctaccggacgacggaaatgtgacaggt
atctatagcgatgtctcttcctggataaatgatactgatctgccggtaaatgccacgtgg
gcgtctctcgataaggaacagtgtgtgaagtatggtggtgagctgattggtccagcctgc
ggcttcgtccccgacgtcactctgatgtcattcatccttttcctggggacctacacttgc
tccatgtgtctcaagaagttcaagttcagccgcttcttccccaccactgtgaggaaactg
atcagtgattttgccatcatcctggctattgtcatcttctgtggtgtggatgccttggtc
ggagtagacacacccaagctcatcgtgccaactgaattcaagcccaccagccccaaccgt
ggctggttcgtgcccccgtttggagggaacccgtggtgggtgtatctggctgcagccctc
cctgctctcctggtcaccatcctggtgttcatggaccagcagatcaccgctgtcatcgtc
aacagaaaggagcacaaactcaagaaaggggcaggctaccacttggacctgttctgggta
gcagtactactcattgtgtgttccttcatgggcctgccctggtacgtggctgccactgtc
atctccatcgcccacatcgactctctgaagatggagacccagtgctcggctcctggggag
cagcccaagttcctgggtgtcagggagcagagagtgaccggtgtcattgtcttcgttctg
actggactgtctgtcttcatggctcccatcctcaagttcatccctatgcccgtgctctat
ggcgtgttcctctacatgggcgtggcatctctcaacggtgtccagttcatggatcgcctg
cagcttctcctgatgcctgccaagcaccagcctgacctgatctacctgcgccacgttccc
cagcgtcgcatccacctgtttaccttcatacaggctctctgtctcgccctcctctgggtc
cttaagtccactgtcgctgccatcatcttccctgtcatgatcttggccctggtggcggtc
agaagggccatggactacatcttctcccagcacgacctcagctacctggacgatgtcatc
ccggagaaagacaagaagaagaaggaggacgagaagaggaagaagaagcagaagaaagga
agcatcgacagtgaaatcgattttgacccccgccgtctttccttgacccacactcagcat
gctgagggctactttaagcccactactgttgcaagtctgaatccattaaaaaaagcagcg
cctcagattaggatcgaactggagcaggaggacaaaagcttcttctggaaaaaacaggct
cagagttctgaaacgtccctttag
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