Oncorhynchus nerka (sockeye salmon): 115101111
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Entry
115101111 CDS
T07952
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115101111
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115101111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115101111
03009 Ribosome biogenesis [BR:
one03009
]
115101111
04131 Membrane trafficking [BR:
one04131
]
115101111
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115101111
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115101111
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115101111
Membrane trafficking [BR:
one04131
]
SNARE
SNARE associated proteins
Others
115101111
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115101111
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115101111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_lid_PRS2_C
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
115101111
NCBI-ProteinID:
XP_029476181
LinkDB
All DBs
Position
LG19:complement(14023986..14093403)
Genome browser
AA seq
805 aa
AA seq
DB search
MASGGESKNDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAKMDELQLFRGDTVLMKG
KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD
TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDTV
IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI
LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII
FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG
RFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAALQ
AIRKKMDLIDLEDETIDAEVMSSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIGG
LEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS
IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVI
NQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILNANL
RKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERECQTNPLAME
VEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSSVPGA
GPSQGSAGGSGGTVFNEDNDDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagaatcgaaaaatgatctatccacagcgattttaaagcagaagacc
aggcccaaccggttggttgtggatgaatctctcaatgaggacaacagtgtggtttctctg
tctcaggcaaagatggatgagttgcagctgttcaggggagacacagtgctgatgaaagga
aagaagagacgggagacggtatgcatcgtgctctctgacgatacctgctccgacgagaag
gtccgcatgaacagagtggtccgcaacaacctgagagtccgcctgggagatgtcatcagt
attcagccctgcccagatgtgaagtacgggaaacggatccatgttctgcccatcgatgac
actgtagaggggatcacagggaacctgtttgaggtctacctcaagccctacttcctggag
gcctacaggcccatcaggaaaggggacattttcctggtgaggggaggcatgcgtgcggtg
gagttcaaggtagtggagacggatcccaacccctactgcatcgtggccccagacactgtc
atccactgtgagggcgagcccatcaaacgagaggatgaggaggagtctctgaatgaggtt
ggctatgatgacattgggggtgtgaggaagcagctggcccagattaaggagatggtggag
ctgcccctgagacacccagcactgttcaaggccatcggcgtcaagcctccaaggggtatc
ctgctgtatggaccccctggaacaggaaagacactgattgcacgtgccgtggccaacgag
accggagccttctttttccttatcaatgggcctgagatcatgagtaaactggctggagag
tctgagagtaacctgaggaaggcctttgaggaggctgagaagaatgcccccgccatcatc
ttcattgacgagctggacgccattgcaccaaaaagagaaaagacacacggtgaggtggag
aggcgcattgtgtcccagctcctcacactcatggatggcctaaagcagcgcgctcacgtc
atcgtcatggcagccaccaacaggcccaacagcattgaccccgccctgaggagatttggg
cgttttgacagggaggtggacatcggcatccctgatgccacaggcagactggagatcctc
cagatacacaccaagaacatgaaactgtccgacgacgtggacctcgagcaggttgccaat
cagactcacggccatgtgggtgctgacctggccgctctgtgctctgaagccgccctgcag
gccatcaggaagaagatggatctcatcgacctggaggacgaaaccattgacgccgaggtc
atgagctccctggctgtcaccatggatgacttcagatgggctctaagccagagcaaccct
tcagccctgagagagacggtggttgaggtgcccaacatcagctgggaggacatcggaggt
ctggaggacgtcaagagggaactccaggagcttgtacagtacccagtggagcacccagac
aagttcttgaagttcggcatgaccccgtccaagggtgtgctgttctacgggcccccaggt
tgtggtaagaccctgctggccaaagctatcgccaacgagtgccaggccaacttcatctcc
atcaaaggtcctgagctgctcaccatgtggtttggagagtccgaggccaacgtccgcgag
atcttcgacaaggctcgccaggccgccccctgcgtgcttttctttgacgagctggactcc
atcgccaaggcacgtgggggtaacgtgggtgatggtggcggagcggccgaccgtgtcatc
aaccagatcctgacagaaatggacggcatgtccagcaagaagaacgtcttcatcatcggt
gccaccaacaggcctgatatcatcgacccggccatcctgaggcccggaagactggaccag
ctcatctacatccccctgccagatgagaagtcccgcatcaacatcctaaacgccaacctc
aggaagtcacccatcgccaaggatgtggacttggatttcctggccaagatgaccaatggt
ttctctggggctgacctgacagagatctgccagagggcctgtaagatggccatcagggag
tccattgagaatgagatcaggagggagagagagtgtcagaccaaccccttagccatggag
gttgaggaggacgaccctgtcccagagatccgtaaagaccactttgaggaggccatgcgt
ttcgcccgccgctcagtcagcgacaacgacatccgcaaatacgagatgttcgcacagaca
ttacagcagagcagaggcttcggcagcttccggttccccactagctctgtgccaggtgct
gggcccagccagggctctgctggtggcagcggtggtacagtcttcaatgaggacaacgac
gacgacctctatggttaa
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