Oncorhynchus nerka (sockeye salmon): 115101172
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Entry
115101172 CDS
T07952
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115101172
03041 Spliceosome [BR:
one03041
]
115101172
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115101172
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115101172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
FUBP_C
Motif
Other DBs
NCBI-GeneID:
115101172
NCBI-ProteinID:
XP_029476307
LinkDB
All DBs
Position
LG19:complement(17638221..17665966)
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AA seq
613 aa
AA seq
DB search
MMMMAELVQGQASVAQPGTKADGFADALHRARQIAAKMGGDQMPHMNNSSPVLDPSLYGY
GGQKRSMDDGVGNQLGGMVHQRAIMTEDFKVPDKMVGFIIGRGGEQITRIQLESGCKIQI
AADSGGMMDRACTLTGSPENIEQAKRLLSQIVDRCRNGPGFHSEMDSNSAIQEILIPASK
VGLVIGKGGDTIKQLQERTGVKMMMIQDGPMPTGADKPLRITGDPYKVQQARELVVEIIR
DKDQGDFRASRGDFGSRLGGSSLDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPVS
PSPSDDGISPDRIAQVMGQSDRCQHAVHLINELVQTAQVQQASPAHSLAGWLPDRASLAP
SQASLDPLALWLGGGGDLLRQVYRQERDGFGSPVGPRGRGRGRGDWNMGAPGGLQEVTYS
IPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFSIRGTHQQMEMARQL
IDEKIGASGMGGNGSFGLNPFGQGPTTPHQNGPQTFLTGGWGTTYQTWQTPGQQDPSQQS
QAQSSGSDYSKAWEDYYKKQSQAAGPGSQQSSPPDYSAAWVEYYRQQGAYYGQGAQQTPA
PGLQRGHPLVEDF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagttggtacagggacaggcctcggtggctcagcctggaacgaaa
gcagatggcttcgccgacgctttacaccgggcccgacagattgcggcgaagatgggaggt
gaccagatgccccacatgaacaactcttctccagtcctagacccctctctctatggctac
ggaggccagaagcgctcaatggatgatggagtaggtaaccagctgggtggaatggtacat
caaagggctattatgacagaagacttcaaagtgcctgataagatggttggattcatcatt
ggaagaggaggagagcagatcacgagaattcagttggagtcaggctgcaagattcagata
gctgcagacagcggcggcatgatggacagggcctgcaccctaaccggaagtccagagaac
attgagcaggccaagaggctgctgagtcagattgtggaccgttgtcggaacggcccgggg
ttccacagcgagatggacagcaacagcgccatccaggagatcctcatccctgccagcaaa
gtgggcctggtcattggcaagggaggggacaccatcaaacaactgcaggagagaaccggt
gtgaagatgatgatgatccaggatggccccatgcccactggagcagacaaacccctgaga
atcactggggacccctacaaagtgcagcaagcacgagagctggtggtggagatcatccgg
gacaaggaccagggagacttccgggccagcaggggagactttggctccagactgggggga
agcagtctggatgtggcagtccccaggtttgctgtgggcatcgtcattggcaggaacgga
gagatgatcaagaagatccagaatgactctggggtcaggatccagttcaaaccagtgtcc
ccctctccttcagacgatggcatcagtcccgaccggattgcccaggtgatgggccagtct
gaccgttgccagcatgcagtgcatctcatcaacgagctggtccaaacggcacaggtacag
caggcctccccagcccattctctagctggctggctcccggacagggccagcctggccccc
tctcaagcttctctggaccccctagccctgtggctgggtggtgggggggacctcctcaga
caggtgtacagacaggagagggatggctttgggagtcccgtggggcccagaggccggggc
agaggccgcggagactggaacatgggtgcgcctggtggactgcaggaagtgacgtactcg
atacctgccgacaagtgtggcctggtgattggaaaaggtggcgaaaccatcaagaacatc
aaccagcagtccggagcgcacgtggagctgcagagaaacccgccacctaacactgacccc
aacgtgcgcatcttctccatccgcggcacccaccagcagatggaaatggcccgccagctg
atcgatgagaagattggggcctcaggaatggggggcaacggcagttttggtctgaaccca
ttcggacaaggaccaactaccccgcatcagaatggaccccagacattcctgacaggagga
tggggcacaacatatcagacatggcagactccgggccagcaggaccccagtcagcagagc
caagcccagagcagtggctctgactacagcaaagcatgggaggattactacaagaaacag
agccaggcagcaggccccggctcccagcagagctcccctccggactacagtgctgcctgg
gtggagtattacagacagcagggggcctactatggccagggtgcacagcagacaccggcc
ccaggccttcagagaggacaccctttagttgaagatttttga
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