Oncorhynchus nerka (sockeye salmon): 115101185
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Entry
115101185 CDS
T07952
Name
(RefSeq) transient receptor potential cation channel subfamily V member 6-like
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115101185
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115101185
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
115101185
NCBI-ProteinID:
XP_029476337
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Position
LG3:1226376..1236618
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AA seq
727 aa
AA seq
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MAPPLARSAPGKLNHWWSQLRFRLQNRKGWNEMLDETFLLQNKRTNDIPLFFAAKENSAG
CIKKLLDCASTNIFERGALGETALHVAVLNDNMDAAIALMDGAPELINEPMTSDLFSGMT
PLHIAVLNQNFNLVRSLIGKGADVATPRVTGLYFRKRRGGLLYYGEHILAFAACVGNQDI
ISMVINAGASTRAQDSIGNTVLHILVLQPNKTLACLALDLLLAHDIELDQTVPLDMVPNY
RGLTPFKLAAKEGNLVAFQHLVNRRRVVQWNLGPLSSNLYDLSEIDSLVADDDLSVLELI
VGSQRREARRILEVTPVRQLVSLKWNLYGKHYFRLLLLLYLLYIGTFTLCCVYRPLKDAP
ENYTVSDMDKTIRVQKTLKESYVTYGDNLRLAGEMISVLGALVILLLEIPDMLRVGAKQY
FGQTALGGPFHVILIAYAFLVVLLCVFRVSGVQGEAVVMAVCLVLGWSNVMFFARGFQML
GPYVIMIQKIIFGDLTKFMWLSFIVLMGFSTSLWMVYMTQDPDSLPAYRSFPITLFSQFE
LSVGLIDLPVDHTITTPPIVHVLHCTFSVVSYILLLNLLIAMMSDTHWRVAQERDELWRT
QVVATTLMLERRLPRCLWPRLGVCGLLYGLGERWYLRVEDRNDPLVQKMRRYVQAFSKDE
DQSKEREEMENTDMSKGTGSPLIRPKHRGGIDGNRKSLACWQMIRHSALGLDVEQEEPED
DQEVRYV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcccctggcaagatctgctccaggtaaactcaaccattggtggagccagctc
aggttccgcctccagaacaggaaggggtggaacgagatgcttgatgaaacatttttgctg
cagaacaaaaggacaaatgacatccctctcttctttgcggccaaagagaacagtgcaggt
tgcattaagaaacttctggactgtgcatccactaacatctttgagagaggtgctctgggg
gagacagcgctgcatgtggcagttctgaatgataacatggatgctgccatagctctgatg
gacggagcacctgaactcatcaatgagcccatgacctctgacctcttctcaggcatgaca
cctctccacattgctgtgttgaatcagaactttaacctggtccgcagtctgattggtaaa
ggggcggatgtggccacgcccagagtcacaggcctgtacttcaggaagagaagaggaggg
ctgctctactatggtgagcacatcctggcatttgcggcctgtgtggggaatcaggacatc
atttccatggtgatcaacgcaggagccagcaccagggcccaggactccattggtaacaca
gtgctccatattctggtcctgcagcccaataagactttagcatgcctggcgttggatctg
ctgttggcacacgacattgagctggaccagactgtgccactggacatggtgcccaactat
cgtggcttaacgcccttcaaactagctgccaaggagggcaaccttgtggccttccagcac
ctggtcaaccggaggcgagtcgtccagtggaacctgggaccactgagctctaacctctat
gacctctcagagatcgactccttggtcgccgacgacgacctctctgtgctggagctcatc
gtgggcagccagaggagagaggcaagaaggatactggaagtgactcctgttaggcaattg
gtcagtctcaagtggaacctctatggaaaacactactttaggttgttgctgctgctgtac
ctcctgtacattgggaccttcacactgtgttgtgtgtatcgccctctaaaggacgctcca
gagaattacactgtatctgacatggacaaaaccatccgcgtgcagaaaactctgaaggag
agttatgtgacctatggggacaacttgcgtctggcaggagagatgatcagtgtcctgggt
gccctggttattctgctactggagatcccagatatgctgagagtgggggccaagcagtac
tttggacagacggccctggggggacccttccatgtcattcttattgcctatgcgttcctg
gtagtgctgctgtgtgtgttcagggtcagtggggtgcagggggaggcagttgtcatggct
gtgtgtctggtgctgggctggagcaatgtcatgttcttcgcccgaggctttcagatgctg
gggccttacgtcatcatgatacagaagattatatttggagacctgaccaagttcatgtgg
ctgagcttcatcgtgctcatggggttttctacctccctgtggatggtgtatatgactcag
gacccagactctctacctgcgtaccgctccttccccatcactctgttctcccagtttgag
ctgagtgtgggtctgatagacctgccagtggaccacaccatcacaacgcccccaattgtc
catgtgctgcactgcaccttctctgtggtctcctacatactgctgctcaacctgctcata
gccatgatgagtgatacacactggagagttgcccaggagagggacgagctctggaggaca
caggtggtggccactaccctgatgttggagaggaggttgccccgctgcctgtggccccgg
ctgggggtgtgtggactgctctacggcctgggggagcggtggtacctccgggttgaggat
cgcaacgacccactggtgcaaaagatgcgtcgctacgtgcaagccttctctaaggatgag
gaccagagcaaggagcgggaggagatggagaacactgacatgtcaaaaggaactggaagc
cctctgatcagacccaaacacagaggtgggatagatggaaacaggaagtccctggcatgc
tggcagatgattcgccacagcgctctgggtttagatgtggaacaggaagagcctgaggat
gaccaggaagtaagatacgtctga
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