Oncorhynchus nerka (sockeye salmon): 115101220
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Entry
115101220 CDS
T07952
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5 isoform X1
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115101220 (gtf3c5)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
115101220 (gtf3c5)
TFIIIC, fungi type
115101220 (gtf3c5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Motif
Other DBs
NCBI-GeneID:
115101220
NCBI-ProteinID:
XP_029476402
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All DBs
Position
LG19:complement(21027228..21042056)
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AA seq
526 aa
AA seq
DB search
MAASGLDDLNFTMKEITGSGSTSDETFTASVVPESSSTLSLSEDNKLVCVEYPGIISNVD
KMLESIGGIQGMSKTYADPSRRLELRFRPQDPFCHPVCGNRYPSTNLLLRMKRRVRKGNP
KEAQISMDILGVIGTTYKFQGMADFQYLAVHSAKDGSHTSLYDKIILRKPENNEFFEQPV
PLFLPPPIFSRLDSAVDYNYRPEIQHKEGHCPPTVSRDNLIGLSRARRPHNAIFLTFNDQ
NIPTEPLEAAKVNWKRVCVHPSDIKAEEQLKEMFESRPIWSGYAVKANLDLHPDKLKLLL
PIMAYYMVTGPWRSLWVRFGYDPCKTPEAKKYQVLDFRIRCSTKHGYTINDMPVKAKRST
FNYTLPITLNKAVPQAANVTDLPPEGPAGGRSANVTRYQLKDSSYIFRDGTLPPHRQMFY
QLCDLDVESIRNVISRNDGQEEECDERDGWCLSHTSDDLRDIMSSMIKQVIRAKRSAPYS
SGPESSITSRKTPESGEDDEEENEEDEFHPSEGSDNEMQTEMLDYM
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatcggggttggacgatttgaattttacaatgaaagagataactggctccggc
agcacaagtgatgagacgttcactgccagtgttgtgcctgagagttcgtcgactctttcc
ctatcagaggacaataaactcgtctgtgtggaatatccaggtattatctccaatgtggac
aagatgctggaaagtattgggggtatacaagggatgtccaagacctatgctgaccccagc
agacggttggaacttcgctttcgtccccaggacccgttctgtcaccctgtctgtggaaac
cgttacccctccaccaacctgctgctgcgcatgaaaaggagggtgcgtaaaggcaacccc
aaggaagcccaaatcagcatggacatcctgggtgtcattgggacaacatacaaattccaa
gggatggcagacttccagtatcttgcggtgcattcggcaaaggacggctcacacacatcc
ctctacgataagatcatcttgcgtaaaccagagaataatgagttctttgagcagcctgtg
cccctcttccttcctccacccatcttctctcgcctggacagtgctgtggactataactac
cgacctgaaatccaacacaaagaaggccattgtcccccaacagtctccagggataatctg
attggtttgagtcgagcccgtcggcctcataatgccatcttcctcacttttaacgaccag
aacatccccactgagcccctggaggctgccaaggtcaactggaagagagtgtgtgttcac
cccagtgacataaaggcagaggaacaactgaaggagatgtttgagagccggcccatctgg
tccgggtacgcggtcaaggccaacctggacctccaccctgataaactgaagctgctgctc
cctatcatggcctactatatggtgacaggcccctggaggagcctctgggtgagatttggc
tacgacccttgcaagacaccagaggccaagaaataccaggtgctggacttcaggatccgc
tgcagtaccaagcacggatatactataaatgacatgccagtgaaggccaagaggagcact
ttcaactataccctgccaatcacacttaacaaagcagtgccccaggctgctaatgttaca
gatttacctcctgagggccctgctggtggacgtagtgcaaatgtaaccagataccagctc
aaggattcctcatacatattccgagatgggaccctgcccccccacaggcagatgttctac
cagctctgtgatctggatgtggagagcataaggaacgtgatcagtcggaacgatggccag
gaggaggagtgtgacgagagggatggctggtgtctgtcccacacctctgatgacctccga
gatatcatgtcctccatgatcaagcaggttatccgtgccaagaggtcagctccatactct
tctgggcctgagagttctattaccagtcgaaagaccccagaaagtggagaggatgatgaa
gaggagaatgaggaagatgagtttcatccctcagaggggagtgacaatgagatgcagaca
gagatgctggattatatgtga
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