Oncorhynchus nerka (sockeye salmon): 115101301
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Entry
115101301 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115101301
04082 Neuroactive ligand signaling
115101301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115101301
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115101301
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115101301
NCBI-ProteinID:
XP_029476534
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All DBs
Position
LG19:25034458..25164863
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AA seq
475 aa
AA seq
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MAATLQKLAVFVSGIWICLLLLNPFPQTGAVVGHREPMPDDSRDNITIFTRILDRLLDGY
DNRLRPGLGAESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDTHACPLKFGSYAYTNNEVVYLWTKGDEGSVVVADDGSRLNQYDLLGHVIGKESMIS
STGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEAQE
MRRRESASLSKKANNTFNIVGTTYTLNEAKDPGLTTVSRSATTATHHQHHHHHHHSHKVP
KMDDNYVEAIKSYNRVSRVDKISRIIFPVLFFIFNLVYWATYINSKPPPKSTTHN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactctccagaaacttgcagtattcgtgtcgggcatatggatctgcctcctg
ctcctcaacccctttccacaaaccggggcagtggttgggcacagagagccgatgcctgac
gacagtagagacaacatcactattttcacccggatcctggacagacttctggatggctac
gacaaccggcttcgccccggactaggagcagagagtgtgacggaggtgaggacaaatatc
tacgtgaccagctttggaccagtgtcagacacagacatggagtacaccatcgatgtgttc
ttccgtcagagctggagggatgagaggctgaagtttgacgggcccatgcaggtcttgcct
cttaataacctcctggccagtaagatctggactccagacaccttcttccacaacgggaag
aaatctgtggcccacaacatgaccacgcccaacaaactgctacgactggtggacaacggt
accctgctttacactatgaggctaaccatccacgctgagtgtcccatgcacttggaggat
ttccccatggatacacatgcctgccctctgaagtttgggagctatgcgtatacaaacaat
gaggttgtctatctctggaccaaaggagatgagggctctgtagtcgtagcagatgatggg
tcaaggctaaaccagtatgacctactgggccatgttattgggaaagaatctatgatttcc
agcacaggagaatatgtagtgatgacaacgtatttccatttgaaaaggaaaattggctat
tttgtgattcaaacctaccttccgtgcatcatgactgtcatcctgtctcaggtctccttc
tggctaaacagagagtcggttcccgcccgcactgtattcggtgtcaccacagttctaacc
atgacaaccctgagtatcagtgccaggaactccctgcctaaggtggcttatgccacagct
atggactggttcatggcggtatgctatgcctttgtcttctctgccctgatagagtttgcc
acagtcaactactttaccaagcgcagttgggcgtgggatggcaagaaagaggcccaggag
atgaggagaagagaatctgcctctctttccaaaaaggccaataacacattcaacattgtt
ggaactacatacaccctcaacgaggcaaaggacccaggtttaaccaccgtctccaggagt
gccactacagctacacaccaccaacaccaccaccaccaccaccacagccacaaggttcct
aaaatggacgacaattacgtggaagccataaagtcctacaaccgtgtcagcagagtggac
aagatctcacgcatcatcttccctgtgttgttcttcatcttcaacctggtctattgggcc
acgtacatcaacagcaagccgcctcccaagtccaccacccacaattaa
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