KEGG   Oncorhynchus nerka (sockeye salmon): 115101325
Entry
115101325         CDS       T07952                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115101325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115101325
   04121 Ubiquitin system [BR:one04121]
    115101325
Spliceosome [BR:one03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    115101325
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    115101325
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115101325
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 115101325
NCBI-ProteinID: XP_029476582
LinkDB
Position
LG19:25814949..25821800
AA seq 780 aa
MGSSKKHKEKGRDKDKDAEERGHREHKKHRHKDRERDKERDGNREREKRKRSRSKERSVR
GSERDGRSKGERSTGEPRVKKEKVEPGCEGTEIAPQSASGDASLTIEETNKLRAKLGLKP
LEMTDTTKELGTKEQPIVAETINPVYIKQQKEMREKLAALKEKRLLNKKLGKVKTLAEDD
WLDDTVAWVERSRKMSKEKELAEKRAKLLQEMDEEFGVSNLVEEEFGQTKKVAYSSRDLK
GLTVQHKMESFNEGETVILTLQDKGVLDEEGGDVLVNVGLVDKENAEKNVELKKKKPDYK
AYEEDESVDDMVTFKPRTVLGKYDEEIDGEKKKSFRLSKGGCAEGERERELQAIRETLRN
QAQSLEMPVLAIASEYYTPQEMVGFKKTKQRVRKIRKKEKALPDELQLDDTRNTDFGSRA
RGRGRKQLDEEGQEGVKERVIIPGLDVPQQSDDIRMADMDISDDENFTPPDPAVLEEDEA
EQELQKQLEKQRKLKQKQLLKNSGEKVAEQVRGLARGDDSDDEEDKNNLNIVFNATSEFC
RTLGDIPTYGLSGNREDQEDIMDFEQEAERDGAGGSDSDGDENVGWSIVNVDEEQKQPDF
ATASTTILDEEPIVNSGLAAALALCKNKGLLDTQMQKISRVRAPTGALPNDNYSIEDKMT
IDDKYSRREEYRGFTQDFKEKDAYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGK
MKTERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgggttcgtcgaaaaaacacaaggaaaagggccgtgataaagataaggatgccgaagaa
cgtggtcaccgcgaacacaaaaaacaccgtcataaggaccgggagagggacaaggaacga
gatggcaaccgagagcgggagaaaaggaaacggtccagatcgaaggaaaggagtgtacgg
ggttccgagagagacggtcgcagtaaaggggagaggagtactggggagcctcgcgtaaag
aaagaaaaagtggagcccggatgtgagggcacagaaattgcaccacagtctgcaagtgga
gatgcctcgcttaccattgaagagacaaacaagctgagggccaagcttggtctgaagcct
ctggaaatgactgacaccactaaagagctcggcacgaaggagcagccaattgttgcagag
acgatcaacccagtgtacattaaacagcagaaagagatgagggagaaactggcagctctg
aaggaaaagaggctcctcaataagaaactggggaaagtgaagaccttagcagaagacgac
tggctggatgacactgttgcctgggttgagaggagccggaagatgtccaaagagaaagaa
ctggcagagaagagagccaagcttctgcaggagatggatgaggagtttggtgtgagcaat
ctggtggaggaggagtttggacagaccaagaaggtcgcttacagctcccgggacctaaag
ggtctcactgtccagcacaagatggagtcatttaatgaaggggagactgtcattctcaca
ctgcaagacaaaggtgtgcttgatgaagaggggggcgatgttcttgtaaatgtgggtctg
gtggataaagaaaatgctgagaagaatgtggagttgaagaagaaaaagcctgattacaaa
gcctatgaagaggacgagagtgtggatgacatggttacgttcaagccgcgtactgtgctg
ggcaagtatgatgaggagattgatggagagaagaagaagagtttccggctgagcaaaggg
ggctgtgctgagggggaacgggaacgggagctccaggccatcagggagaccctgaggaac
caggcccagtccctggagatgcctgttctcgctattgcctcagagtactacacaccccag
gagatggtgggctttaagaagaccaagcagcgcgtcaggaagatcaggaagaaggagaag
gcattgcctgatgagctccaattagacgacacacgcaacaccgactttggctccagggct
cggggtcggggtcgcaagcagttggatgaggagggccaggaaggggtgaaggagcgtgtc
atcataccgggactagatgtaccccaacagtcagatgacatcaggatggcggacatggac
atcagtgacgatgagaacttcaccccccctgatccggctgtgctggaggaggacgaggca
gagcaggagctgcaaaagcagctggagaaacagcgaaaactcaaacagaaacagctgctc
aaaaactctggggaaaaggtggcagagcaggtccgagggcttgcaagaggggacgacagt
gacgatgaagaagacaagaacaacctgaacattgtgttcaatgccacctctgagttctgc
agaactctgggtgacatccccacctacggcctgtcgggaaaccgagaggaccaggaggac
atcatggatttcgagcaggaggcggagagagatggcgctggcggttcagactccgacggg
gatgagaatgttggctggagcatcgtcaacgtggatgaggagcagaagcagcctgatttt
gccacagcctcgaccaccatcctggatgaagaacccattgtcaactctgggctggctgct
gccttggcgctctgcaagaataagggtctcttggacactcaaatgcagaagatatcccgt
gtccgtgcgcctaccggtgccctgcccaatgataactacagcattgaggacaagatgacg
atagatgacaagtacagtcggagggaggaatatagaggcttcacccaggacttcaaggag
aaggacgcctacaagccagatgtcaagatagagtatgtggatgaatctggacggaagctc
actcccaaagaggctttccggcagctctcacatcgattccatgggaaggggtctggcaag
atgaagactgagaggaggatgaaaaagctggaagaggaagcgctgctgaagaagatgagc
agtagcgatacccctctgggaactgtcgctttgcttcaggagaaacagaagtcacagaaa
accccctacattgttctgagtgggagtgggaagagcatgaatgcaaacaacatcaccaaa
taa

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