Oncorhynchus nerka (sockeye salmon): 115101333
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Entry
115101333 CDS
T07952
Name
(RefSeq) syntaxin-5-like
KO
K08490
syntaxin 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115101333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115101333
Membrane trafficking [BR:
one04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
115101333
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
UPF0242
Motif
Other DBs
NCBI-GeneID:
115101333
NCBI-ProteinID:
XP_029476596
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All DBs
Position
LG19:complement(25941765..25950254)
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AA seq
350 aa
AA seq
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MNTRRRHGPRNSQEGVYLGPAQTQSPLIQLQDPQLTAPSPPPPAPLVDISNMSGRDRTNE
FQSVCRSLQGRQNAVQSSKPALSAVRQRSDFTLMAKRIGKDLSNTFAKLEKLTILAKRKS
LFDDKAVEIEELTYIVKQDINSLNKQIAQLQGLVRSRQSQNGKHLQTHSNTIVVSLQSKL
ASMSNDFKSVLEVRTENLKEQKSRRDQFSQAPVSSSHLHASNFGNSLLMQDDSKRTAEVS
IDMDFRASQQLQLVNEQDSYIQSRSDTMQNIETTIVELGSIFQQLAHMVKEQEETVQRID
ANVEDTQLNVDMAHSEILKYFQSVSSNRWLMVKIFLVLIVFFIVFVVFFA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcgtcgtcgccacggtcctaggaacagccaggaaggggtgtacctagggcct
gcccagacccagtcaccgctgatccagttgcaggacccacaactcacagcccccagtcca
ccgccacctgccccactggtggacataagcaacatgtcgggcagggaccgcaccaatgag
ttccagtcagtctgcaggtcactacaggggagacagaatgcggtccagtccagcaagcca
gccctcagtgccgtcagacagcgcagtgactttacactcatggcaaagaggattgggaag
gacttgagtaacactttcgccaaactggaaaaactcacaatacttgccaaaaggaaatct
ctttttgatgacaaagctgtggagattgaggagttaacctacattgttaaacaggacata
aacagtctgaataaacagatagcacagctgcagggtcttgtgcgctccagacagagtcag
aatggcaaacacctacagacacattccaacaccatcgttgtctccctccagtccaaactg
gcatcaatgtcaaacgacttcaagtcggtgctggaggtcaggacagagaacctcaaagag
cagaagagtagaagagatcaattttctcaagccccagtatcctcctcccatctacatgcc
agcaacttcggtaactcattgttaatgcaggatgactctaaaaggacagctgaagtctct
atagacatggacttccgtgccagccaacagctgcagcttgtcaatgaacaggactcgtac
atccagagccgttcagacaccatgcagaacatagagaccaccatcgtagagctgggctcc
atcttccagcagctggcccacatggtgaaggagcaggaggagacagtgcagagaattgac
gccaatgtggaggacacccagctcaacgtggacatggcacactccgagatcctcaagtac
tttcagtctgtctcatccaaccgctggctcatggtcaaaatcttcctcgtcctcatagtc
ttcttcatcgtctttgtggtcttctttgcttga
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