Oncorhynchus nerka (sockeye salmon): 115101443 Help Entry 115101443         CDS       T07952                                  Name (RefSeq) calpain-1 catalytic subunit-like   KO K01367   calpain-1 [EC:3.4.22.52] Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04141   Protein processing in endoplasmic reticulum one04210   Apoptosis one04217   Necroptosis one04218   Cellular senescence one04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:one00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     115101443  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     115101443    04217 Necroptosis     115101443    04218 Cellular senescence     115101443  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115101443  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:one01002]     115101443 Enzymes [BR:one01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      115101443 Peptidases and inhibitors [BR:one01002]  Cysteine peptidases   Family C2: calpain family    115101443 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh EF-hand_5 Ndufs5 Motif Other DBs NCBI-GeneID:  115101443 NCBI-ProteinID:  XP_029476790 LinkDB All DBs Position LG19:complement(29102651..29110411) Genome browser AA seq 712 aa AA seqDB search MEQVMEQVIERVFASGVAARLRSQWDRNEGIGQNDKALKFLGQDFEYLRSHSLQSRRLFE DDAFPAQISSLGFKELGSCSTKTQGVRWMRPTEFCSDPHFIVDGATRTDVCQGALGDCWL LAAIASLTLNETLLHRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLF LHSAEGAEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELKKAHPDLFSI ISRAVERGSLLGCSIDISGVFEMEAMTFKKLVKGHAYSVTGVEEVEFKGSPTKLLRIRNP WGEVEWTGAWSDNSREWAGVDPSVRARLYNRSEDGEFWMSFRDFLREFSRLEICNLTADA LQASQVKKWSSTLYPGEWRRGSTAGGCRNYPATFWLNPQFKVALQHPDTDGQSGCSFLVA LMQKDRRRQRREGKDMETIGFTIYEVPEEFTGRAGVHLKRDFFLTHGSSARSELFINLRE VSTRFCLPQGEYIVIPSTFEPQKDGDFVLRVFSEKPADSQELDDDITADLPEEVELDESQ IDAGFKGLFRQLAGAEMEISATKLQTILNRIISKHKDLKTDGFGKEACRCMITLMDTSGT GKLGLTEFHVLWEKIKRYLTVFRKFDLDKSGTMSSYEMRMALESAGFKLTNHLFQLIILR YAKEDLNVDFDNFVNCLIRLETMFKTFKEMDTDVDGVVSFSFFQWISLTMFA NT seq 2139 nt NT seq  +upstreamnt  +downstreamnt atggagcaggtgatggagcaagttattgaacgtgtgtttgcctctggagtggctgctcgt ttgaggagccagtgggaccgcaatgagggcatcggtcagaatgacaaggccctgaagttc ttaggccaagactttgaatatctccggtcccacagtctgcagagcagacggctgtttgag gacgatgcattccctgctcagatctcgtcgctgggcttcaaggagctggggtcatgctct acaaagacacagggggtccgatggatgcgccccacggagttctgctctgaccctcacttc atcgtagacggagccactcgcactgacgtctgccagggagctctgggtgactgttggctg ctggcagcgattgcttcacttacactgaatgagactctactacatcgggtggtgccccat gggcagagcttccaccaacagtatgctgggatctttcacttccagttctggcagtttggg gagtgggtggatgtggtgattgatgacaggctgccagtgaaggatgggaagctgctgttt ctccactcagcagagggggctgagttctggagcgccctgctggagaaggcctacgcaaag ctcaatggctgttacgaggccctctcagggggcagtacatcggaggggtttgaggacttc acagggggcgtgacagagatgtttgagctgaagaaggcccatccagacctgttcagcata atcagtagagcagtggagcgaggttccctgctgggatgctccatagatatctctggtgtt ttcgagatggaggcgatgacattcaagaagctggtgaaaggccatgcctactctgtgaca ggtgtggaggaggtggagtttaaaggaagtcccaccaagctcctgcggatcaggaacccc tggggagaggtggagtggaccggagcctggagtgacaattcaagagagtgggctggagtt gacccatcggtcagagctagattgtacaaccgtagcgaagatggcgagttctggatgtca ttccgtgactttctgcgtgagttcagccgtttggagatctgtaatctgacagcagacgcc ctgcaggccagccaagtgaagaagtggagctcaacgctctaccctggagagtggaggaga ggcagcactgcagggggctgcaggaactacccagcaacgttctggctcaaccctcaattc aaagtggcccttcagcacccagacacagatggccaatcaggttgcagcttcctggtggcg ctgatgcagaaggatcgtcgtcggcaacggcgtgaggggaaagacatggagaccattgga ttcaccatctatgaggttccagaagagtttacaggtcgggccggggtacatctaaagagg gacttcttcctgacccacggctccagtgcccggtcagagctcttcatcaacctgagagag gtcagcacccgcttctgcctgccccagggagagtatatcgtcatcccctccaccttcgag ccccagaaggacggagactttgtgctcagggtgttctctgaaaagccagctgactcccag gaattggatgatgacatcacagctgatctgcctgaggaggtagagctggatgagagccag attgatgcaggcttcaagggtctcttcagacagctcgctggagcggaaatggagatcagt gccacaaagcttcagaccatcctaaacagaatcatcagcaagcataaggacctgaagaca gacggctttggcaaggaggcgtgtcgttgcatgataactctcatggataccagcggcact gggaagctgggcttgacagagttccatgtgctgtgggagaagatcaaacggtacctgact gtgtttaggaagtttgacctggataaatctggcaccatgagctcctatgaaatgcggatg gcactggaatcagctggcttcaagttgaccaaccacttgttccaactcatcatcctacgc tacgcaaaggaagacctgaatgtggactttgataactttgtcaactgtctcatccgtctg gagaccatgttcaagacctttaaagaaatggacactgatgtagatggggtggtttccttc agcttcttccagtggatctccctcaccatgtttgcctag

DBGET integrated database retrieval system