Oncorhynchus nerka (sockeye salmon): 115101556
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Entry
115101556 CDS
T07952
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115101556
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
115101556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
115101556
NCBI-ProteinID:
XP_029476888
LinkDB
All DBs
Position
LG20:40216003..40332396
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AA seq
1161 aa
AA seq
DB search
MADGPRCKRRKQANPKRNNVTNYNNVVEGQSDSDDEDKLHIVEEDPDGDSTLPEDASVVL
TQNGTETHQDTWDGVKEDCGSEEEDEEEGGEEEEEEGGKDALVEEMLQLEDTAVIYPEAP
EDEQKSISERRVPDENGTPDALSQLLTCPYCSRGYKRCTALKEHIKLRHEKSEDNFSCSQ
CSYTFAYRTQLDRHMTQHKTQHKEPVQRHTPQTTTTTGGNRKFMCTECSKAFKYKHHLKE
HLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGTPRPVMKASQTPTTQNQ
LSGTAPVAPTRLLLRGEKTDGKPLQEQLPVNQIKSEPVEYEYKPVAVGPNGAAGTNGTVF
TGGMAVPQGTVQAVVLPTVGLMSPISINLSDLQNVLKVAMDGNVFRQVLGTANGLVTSKQ
RVVGQAGQQVISAISLPGFVDQDGTTKIIINYTLEPSLAQQPSAPQLLKKEPLPAPTTTN
TQPASKVTEILTQDLSIIKTEQPDSESEKEMEKEEAQTEAEAEQSKEGETAKAQTGKTTC
LLCDDCPGGLDALHMLQHCKPTNGEGGDVSPLDPSIAALLAEAGITPGQPPLKNLLSLLK
AYFALNAEPTEEELAKISDNVRLPVDIVKKWFEKMQSGQITVEPPGSSSPLPSTGPSTET
QAAQEKSGEQTEEQLASAQTQETSSSQPPKSSPASTSASPLVSASAPSPLNLSSSGRVIV
KTEEDSEGESQDLPLDLSLPKQPQSEPQVPHVPQEQPLNLTCLKKETSHPQLQTQLQSQQ
PQLQAQIQAQLQPQLQAQLQPQLQAQLPGFQTQLQAQGTTNTIYVTSPPQMATSSPVNIM
TTQLVAITNQGSGVPCLRAISTGTTKRTILIPQLTYTYTTKAGSNATGADGAQKTVILNG
CQEEEKADTSSESVSAVEEQNDSDSAPPQKKMRRLESGMYACDLCDKIFQKSSSLLRHKY
EHTGKRPHECGICNKAFKHKHHLIEHTRLHSGEKPYRCDKCGKCFSHSGSYSQHMNHRYS
YCKKEPQGDHQVGRRLRMTPEMSPQAEEQQSDSRPTSPPSQLDSDERESEEELEEEEGEE
EGMEAMSMDDIRVVQVGEDDEESEIYEVEEFEGERQEEEEEGSREDEKQVTTEGAEAIYI
VKYLPPSPEMYVDHISHLQQQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggaataacgta
acaaattacaacaatgttgtggagggccagtcagactctgatgatgaggacaagctacac
atagtggaggaagaccctgatggtgacagcacgctgccagaagacgcctcagtagtatta
acccagaatggtacagagactcaccaagacacctgggatggagtgaaggaggactgtggc
tctgaagaggaggatgaggaggaagggggggaggaggaggaggaggaggggggtaaggat
gccctggtagaggagatgctacagttggaggatacagcggtcatctaccccgaagctcca
gaggacgagcagaagagcatttctgagagacgggtcccagacgagaatggcacgccagac
gctctttcccagctcctgacctgcccgtactgctcgcggggctacaaacgctgcactgcc
ctgaaggagcacatcaagctgcgccacgagaagagtgaggacaacttcagctgctcccag
tgcagctacaccttcgcctaccgcacacagctggaccgtcatatgacccaacacaagact
caacacaaggaacctgtacagcgccacacaccccaaaccaccacaacaacaggggggaat
aggaagttcatgtgtacagagtgttccaaggcttttaaatacaagcaccacctgaaggag
cacctgcgtattcacagcggagagaagccatacgagtgccccaactgtaagaagcgattt
tcccactccgggtcctacagctcccacatcagcagtaagaagtgtgttggcatggtgcct
gtcaacggtaccccccgaccagtcatgaaggcctcccagacccccaccacccagaaccag
ctttccggcactgcccccgtagcccctacccgactgctcctccggggggagaagacagat
ggcaagccccttcaggagcagctccccgtcaaccagatcaaatccgagccggtggaatat
gagtacaagccggtggcggtggggcctaacggggcagcagggactaacgggacagtgttt
accggtggcatggcggtaccccagggcacggtccaggcggtggtactgcccaccgttggt
ttgatgtctcctatcagtattaatctcagcgacctgcagaacgtactcaaggtggccatg
gatgggaatgtgtttcgccaggtgctggggacggccaacgggctggtgacgtccaagcag
cgggtggtggggcaggctgggcagcaggtcatctcagccatcagcctccctggcttcgtg
gaccaagacggaaccaccaagatcattattaactacaccctggagcccagcttggcccaa
cagcccagcgcacctcagctcctcaagaaggaacctctccctgcccccaccaccacaaac
acacagccagcctccaaagtaacagagatactcacccaggacctcagcatcatcaagacc
gagcagcccgactcggagtctgagaaggagatggagaaagaggaggctcagaccgaggca
gaggcagagcagagtaaggagggtgaaacagcaaaggcccagacaggcaagacaacatgt
ctgctgtgtgatgactgtcctggtggtttggatgcactacacatgctccagcactgtaaa
cctaccaatggggaggggggtgacgtcagccccctggacccctctatcgccgccctgctg
gcagaagcagggataacaccaggccagccccctctgaagaacctgctctccctcctcaag
gcctactttgccttaaacgcagagcccaccgaggaagagctggccaagatctctgacaat
gtcaggttgcccgtggacatagtcaagaaatggtttgagaagatgcagtccggtcagatt
actgtagagccccctggttcctcttcccctctaccttcaacaggtcctagcacagagacc
caggcggcccaagagaagagcggagagcagacagaggagcaactcgcctcggcccaaacc
caggagacatcatcttcccaacctcccaaaagttcccctgcctcgacctccgcctccccc
ttggtctcagcctcggctccttcaccactaaacctctcctccagcggccgggtcatcgtg
aaaacggaggaggactcagagggcgaatctcaagatcttcccctggacctgtcccttccc
aagcagccccaatcagagccccaggtcccccatgtcccccaggagcaacccctcaacctc
acctgtttgaagaaggaaacgtcccatccccagctccaaacccagctccagtcccagcaa
ccccagctccaggcccagatccaggcccagctccaaccccagctccaggcccagctccaa
ccccagctccaggcccagctcccagggttccaaacccagctccaggctcagggaaccacc
aacaccatctacgtcacttcccccccgcagatggccacctccagcccggttaacatcatg
accacccagctagtagccatcaccaaccagggcagcggtgtgccctgtctcagggccatc
tccactggcaccaccaaacggactattctcatcccccagcttacctacacatacaccact
aaagcaggcagcaacgccactggggccgacggagcccagaagactgtcatactcaatggt
tgccaggaggaggagaaggcagacaccagttcagagagcgtgtcggcggtagaggagcag
aacgactcggactcagcccctccacagaagaagatgcgtcggctggagagtggcatgtat
gcctgtgacctatgtgacaagatcttccagaagagcagctccctgctcaggcataaatac
gaacacacaggaaaacgtccacatgagtgtggcatctgcaacaaagccttcaaacacaag
caccacttgatagagcacacgcgtctgcactctggagagaagccctaccggtgtgacaag
tgtggcaagtgtttctcccactcgggctcctactcccagcacatgaaccaccgatactca
tactgcaagaaggagccccaaggagatcatcaggtggggcgtcggctcaggatgaccccc
gaaatgagcccccaagcagaggagcagcaatcagatagccggcccacctcccctccctcc
caattggactcagacgagagggagagtgaggaggagctggaggaagaggaaggagaggag
gaaggcatggaagccatgagcatggacgacatacgggtggtgcaggtgggcgaggatgat
gaagagagtgagatctacgaggtggaggagtttgaaggggagaggcaagaggaggaggaa
gaagggagcagagaggatgaaaagcaggtgaccactgaaggtgctgaggcgatttacatt
gtcaaatatctgccgcccagcccagagatgtacgtagaccacatctcccacctccagcag
cagtga
DBGET
integrated database retrieval system
