Oncorhynchus nerka (sockeye salmon): 115101577
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Entry
115101577 CDS
T07952
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115101577
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115101577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
115101577
NCBI-ProteinID:
XP_029476904
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All DBs
Position
LG20:complement(57808427..57820488)
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AA seq
680 aa
AA seq
DB search
MMTSWSGTKKNALVHLNELRPGLQYEIVSQTGPVHAPVFAVGVEVNGLRFEGQGPTKKKA
KMRAAELALRSFIQFPNAHQAHITMGNLNFINTTAPADFTSDQADLVPDTLFKEFQPEAQ
EDQILIYRAVKKGQELLSSICNHGRLVRLTLDLMSSANQKRQRIGSSIVGELRPVALLNE
LMPGLRYVCLTERKKGRPIRSFVMAVRVDGRVFEGCGRSKRLAKAEAAASALQDLFNISL
GPERSISNTASWAKSAQLPQCFAEYIFHLVREKHSELADCCCTPSQSHRRHKVLAGIVMT
RGFDLRRAQVVSLGTGTKCISGECVSDQGWAVNDCHAEVTTRRAFLRFLYAQLELFLCNR
PCSLEQSIFVRDKESVYRLRDGILFHMYVSSSPCGDARLNCPYEITATHQSGYRFVRKLR
CHLRMKMEGGEGTLPVSILRANQKWDRRLPREAPITMSCTDKIARWNILGLQGSLLSHLV
EPVYLHSLTVGSLCHTGHLGRTMARRMGHIAPLPSSYRRNRLLLGCLSSSEGRPPGKSPS
FSVNWSAGDGELEVVDVSTGRKDSGTPSRLCKRSFFTRWERLHHQLSSPGGVLDAEEAHF
LMSDSTTTLSARSVEGRVSPRSDATCQKKMEEAMKTYCGAKMAAGAYQRARQKFVVSLQE
AGLGIWNRKPPEQEHFQSRV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttcctggtctggcacaaagaagaatgccctggtgcatttgaatgagctgaga
ccaggtctacagtatgagatagtgtctcagacagggccagttcacgcccctgtgttcgct
gtaggagtagaggtcaacggactcaggttcgagggccaaggccccaccaagaagaaggct
aagatgagggcagcagagctggctcttaggtccttcatccagttccccaacgcccatcag
gctcacatcaccatgggaaacctcaacttcatcaacaccacagcaccagcagacttcacc
tcagatcaggctgatctcgtccccgacacgctcttcaaggagtttcagccagaagcacag
gaagaccaaatccttatctacagagcagtgaaaaaaggacaggagttgctctccagtatc
tgtaaccatgggagactagtgcgcctgacccttgacctgatgtcctcagccaatcagaaa
aggcagaggatcggttcctctatcgttggggaactgaggcccgtggctctgctcaatgag
ttgatgccaggcttgaggtatgtctgcctgacagagagaaagaaaggcaggccgatcagg
agctttgtgatggcagtacgggtggatggaagggtatttgagggctgtgggcgcagtaag
aggctagctaaagccgaggcagcagcctcagccctacaggacctgtttaacatcagtctg
ggtcctgagaggagcatcagcaatactgccagctgggccaagagcgcacagctacctcag
tgctttgcagagtatatcttccacttggtgagagagaaacacagtgagctggctgactgt
tgctgcactccctcccagtcgcacaggcgtcacaaagtactggcaggcatcgtaatgacc
agaggttttgatctgaggcgagcccaggtggtgtctttggggacagggaccaagtgtatc
agtggagagtgtgtcagtgaccagggatgggcggttaatgactgccatgctgaggtcacc
accaggagggctttcctccgcttcctctatgcccaactggagcttttcctctgcaaccgg
ccatgcagtttggagcagtcgatttttgtgcgagacaaagagtcagtatacagactgaga
gacggtattctgttccatatgtatgtgagttcatcgccctgcggggacgcacgcctcaac
tgtccctacgagatcacagctacacaccagagcgggtatagatttgtgagaaagttgcgc
tgccatctgaggatgaagatggaaggcggtgagggtacacttcctgtcagcatactgaga
gccaatcagaaatgggacaggaggttgccgagggaagctcccataaccatgtcctgcaca
gataaaattgccaggtggaatattctaggtctccagggctctctcctgtctcacctggtg
gagccagtgtacctccatagcctcacagtgggcagcctgtgccacacgggtcacctggga
aggaccatggcacgacgcatggggcacatcgcccctctgccctcgtcctatagacgcaac
aggctactgctcggctgcctcagcagcagtgagggtcggccgccagggaagtccccaagc
ttcagtgtgaactggagtgctggagatggagagctggaggtggtggatgtctccacaggc
aggaaagactcagggacaccatccagactctgcaagagatccttcttcactcgctgggag
agactacaccaccagcttagcagtccaggaggagtattggatgcagaggaggcccatttt
cttatgtcagatagcacaacgactctgtctgcacggtcggttgagggaagagtatcgcct
aggagtgacgccacctgtcagaagaaaatggaggaggccatgaagacgtactgtggtgct
aagatggcagcaggggcctaccagagagccaggcagaagtttgtcgtctcgctgcaggag
gcaggtctgggcatctggaacaggaaaccaccagaacaggagcatttccagagcagggtg
tga
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