Oncorhynchus nerka (sockeye salmon): 115101583
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Entry
115101583 CDS
T07952
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115101583
03012 Translation factors [BR:
one03012
]
115101583
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115101583
mRNA cycle factors
Stress granule specific factors
115101583
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
eIF-4
115101583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Terminase_7
HMG_box
Motif
Other DBs
NCBI-GeneID:
115101583
NCBI-ProteinID:
XP_029476909
LinkDB
All DBs
Position
LG20:complement(60533455..60583623)
Genome browser
AA seq
1806 aa
AA seq
DB search
MNKPPQPITGPTSVPLPSPSPGLTQLCFSASPLSQATYASGQPTSLVFATQTPQQMNSAP
QPRQFATGPRALHQQGGYRALQPYYANRPTMPTSVTRVQTSSGPRPVGPTHIYQPGSQMM
MIPGQQLSFAGSPQGYFIPPGQYRAPYMPPSPQYPVTSGTAGFYPGTSPAEYPTYEPSLA
VRERRGGGRENGRLSLHGAPLTSQRYPAGAYYPAQPQYSHTPPVQTAPVISPAQPQQQAL
PPQPPTHPPAPKRERVTIRIRDPNQGGRDITEEIMSGGRSTSTPPSQSSTTEEEGPAQTN
GEFTKPVTIVTRTDENAEPADCTVTAAEALPPVLSTPEPTTAAVPLEARQETDGQVAPLT
EQVVSESHAPVAGMRPEVPIPQREDQAPAASPLTASTSPPPAEVQTPPPATAMAQASHTV
GAGMTPAVKAVTPEGPSTQVEPLAAPASVEKPLAQVAEEVVVVEEKVEKVKKEPAVTINP
EVVVAVVVIKEDTKPAPRPVTPIAMATGDDFVPSLKLVAAVEAATKTESVVLPPAPKQKA
MTEPISAPAHAATPSVPEAEPAVAQKKVEQLPLSNGLPQEDPDEVDAPVAAIERIATVIT
EPAAPPPQETANPAAAAVEEEEEEEKKEEEEEEQKEEDASPVPLSSSPSEDSSMQAAVSV
PKKKRNMKELNKKEAIGDMLDAFKEEEAAAPATEPSSSPPEPSPVALTSLPPADAPDETW
EEKEDKQNADTPPLKPGDLKYQYKGEQWKPIDPEEKKRYDREFLLGCQFISASMNKPEGL
PLITDVVLDKANKTPMRPAEPGRNMNAGPDFTPAFMGNLGRQSSGGGGPRGPGRDHMGPP
GPRRSQQGQRKEPRKIITISSSLGGEVELNKAEKAWKPTVKKAVTRGRGASPEDEESDDP
EQAKTQELFKRVRSILNKLTPQMFQQLMKQVTELTIDTEERLKGVIDLIFEKAISEPNFS
VAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDQDDDVIFEAKQKEMEAAK
EEEKAGLKATLEEAKDQARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESLE
CLCRLLSTIGKDLDFEKAKPRMDQYFAQMDKIIKEKKTSSRIRFMLQDVIDLRRSGWVPR
RGEQGPKTIDQIHKDAEQEEHMQQVKVQQQLMSRNDGGGRGGGGGGRDGRGGDRGGRDQV
GRGGQQVGRGSQPQDEGWNTVPISTKNRPIDTSRLSKITKPGALDFSNQLLAPQLGGKGM
WGSWGKGSSGGTTGAKPATGAEPGRGTLKHTHGQRNDRSLPLVTIALSPRKARSLSPLPF
CRSSSSRDRDRFDRFERHDSSRDERGGSRDARPPITKRSFSRETEERRGDSCTPTEPPVR
RVASMTDDRDRGGSGSRGGSGSRGGSRSRGGSGSRDRAPSKEVVVKRETAPTPPPDAPTK
PAVTEEELEKKSSAIIEEYLHLNDMKEALQCVVELNSAPLLFVFVRNGLENTLERSAIAR
ERMGLLLHQLIKAGTLPTTEYYKGLQEILEVAEDMAIDIPHIWQYLSELINPMLHEGGIP
MGQLFREISKPLIPLRKAGVLLVHILNLLCKEMTHKKVGGMWMEAGLNWRDFLPEDEDVN
KFVTEQKIEFTLGEKSDGTNQKTTMSGEELSKQLDRLIQDKANNQRIRDWVQANLDEQQT
SANQFVRSLMTSICQSAVICENPYKVDVEQITQRAKLLQQYLSDEKKELQALYALQALMV
HMEQPANLLRMFFDTLYDEDVIKEEAFYRWESSKDPAEQTGKGVALKSVTAFFTWLRDAE
EESDKD
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccaccgcagcctataacgggacccacctctgtcccactcccctccccctcc
cctggcctgacacagttgtgtttctctgcctcccctctttcccaggctacctatgcctct
ggacagcccacttctcttgtcttcgccacccaaacacctcaacaaatgaattctgcaccg
cagccacgacagtttgccaccgggccccgtgctttacaccaacagggtggatacagggca
ctgcagccttactatgccaacaggcccacgatgcccaccagtgtcaccagggtccagacc
agcagtgggcctcgtccggttggtcccacccacatctaccagcccggctcccagatgatg
atgatccctggtcagcagctgtcctttgctggctcccctcagggctacttcatcccccct
ggacagtatcgggctccctacatgccaccaagtccacagtaccctgtgacaagtgggaca
gcaggcttctacccaggcaccagcccggctgaataccccacctatgagccctctctggct
gtgagggagaggagagggggcgggcgagagaatgggcgtctctctctccacggtgctcct
ctcacctcccagcgctaccctgcaggtgcctactacccggcccagccccagtacagccac
acaccccctgtccagaccgcgcctgtcataagccctgcccagccccagcagcaggccttg
ccccctcagccgccgacccatccaccggcacccaagagggagcgcgtaacgatcagaata
cgagaccccaaccaagggggccgtgatatcacagaggagatcatgtccgggggaaggtcc
acctccacccccccttcacagtcctccaccacagaggaagaaggtcctgcccagaccaac
ggggaatttactaaacccgtcaccatcgtgacgagaacagatgaaaacgcagaacccgcg
gattgcacagtgacggccgccgaagccctgcctccagtgttgtcaactccagagcctacc
actgcagctgtcccactggaggccagacaggaaaccgatggccaggttgccccgcttacc
gaacaggtcgtcagcgaatcgcatgccccggtggcggggatgaggcccgaggtgcccatc
ccacaaagggaagaccaggcccctgccgcctcccccctgacagcttctacctcccctccc
cctgcagaggtacagactccaccccctgccaccgccatggctcaggccagccacacagtg
ggcgctggtatgacccccgcggtgaaggcagtgaccccggaaggtccttccacacaggta
gagcctctggctgcaccagcatctgtggagaagcctcttgcccaggtagcggaggaagta
gtagtggtggaggagaaggtagaaaaggtcaagaaggagccggcagttaccatcaatcca
gaggtagtagtggctgttgtggtcattaaagaagacactaaacccgctccacgacctgtg
acccccatcgccatggcaacgggcgacgatttcgttccgtccttgaagttggtggcggct
gtggaagcggccactaaaactgagagcgtggtgttgccgccagcgcctaaacagaaagcc
atgaccgagcccatttctgcccctgctcatgccgccactccctctgtcccggaggcggag
cctgctgtggcccaaaagaaggtggagcagctgcccctgtccaacggcctcccccaggag
gaccccgatgaggtagatgcccccgttgctgcaatagagcgcattgcaactgtaatcaca
gagcctgccgctcccccacctcaggaaactgctaaccctgcagctgctgccgtggaggag
gaggaggaggaggagaagaaagaagaggaggaggaggagcagaaagaggaggatgcatcc
ccagtgcccttgtccagcagcccttcagaggactcgtctatgcaagctgctgtgtctgtg
ccaaagaagaagaggaacatgaaggagctgaacaagaaggaagccatcggagacatgctg
gatgccttcaaagaggaggaggcggcggcacctgccaccgagccgtcgtcttcaccgccg
gagcccagccctgtggccctgacctccttgccgcccgccgacgcgccagacgagacgtgg
gaagagaaggaggacaagcagaacgccgacacacccccgctcaaaccgggcgacctcaag
tatcagtacaaaggagagcaatggaagcctatcgacccagaggagaagaagaggtacgac
agggagttcctgctgggttgccagttcattagtgccagcatgaacaagcctgagggcctg
cctctcatcacagacgttgtgctagataaggcgaataagacccccatgcgcccagcggag
cctggtcgcaacatgaacgccgggccagacttcacccccgccttcatgggtaacctgggt
agacagtcctctgggggagggggaccacggggccctggaagggaccacatgggacccccc
ggaccacggcgctcccagcagggccagcgcaaggagccccgcaagatcatcacaatctcc
tcatcgctaggtggcgaagtggagctcaacaaggcggagaaggcctggaagcccacagtg
aagaaggctgtgacccggggccgaggcgcctcccccgaggatgaggagagcgacgacccc
gagcaggccaagacccaggagctgttcaagagggtccgctccatcctcaacaagctgacc
cctcagatgttccagcaactgatgaaacaggtcacagagctgaccatcgacacggaggag
cggctgaagggagtgatcgacctgatctttgagaaggccatctccgagcccaacttctct
gtggcctacgcaaacatgtgccgctgccttatggggttgaaagtgcccaccacagacaag
ccgggagtgactgtaaacttccgcaagctgctgctcaaccgctgtcagaaagagtttgag
aaggaccaggatgatgacgtcatctttgaggccaaacagaaggagatggaggctgccaaa
gaggaggagaaagctggtctgaaggcgacgttggaggaggccaaagaccaggcgcggcgg
cggtcgctgggcaacatcaagttcatcggtgagctgttcaagctgaagatgctgacggag
gccatcatgcacgactgcatcgtcaagctgctgaagaaccacgacgaggaatcgctggag
tgcctctgtagactgctgtccaccatcggcaaggacctggactttgagaaagccaagccc
cgtatggaccagtactttgcccagatggacaagatcatcaaggagaagaagacctcatct
aggatccgcttcatgctgcaggacgtcatcgacctcagacggagtggctgggtgccccgg
cggggggagcagggtcctaagaccattgaccagatccacaaggatgctgagcaggaagaa
cacatgcagcaggtcaaggttcagcagcagctcatgtcaaggaacgacggaggaggacga
ggaggtggtggagggggaagagacgggagggggggagacagaggaggaagggatcaggtg
ggccgcgggggccagcaggtgggaaggggcagccagccccaggacgagggctggaacaca
gtgcccatctccaccaagaacagacccatcgataccagccggctcagcaagatcactaag
cctggtgctctggacttcagcaaccagcttcttgctccccagctcgggggtaagggcatg
tggggcagctggggcaagggcagcagtggaggcaccacaggagccaagcctgccactgga
gctgaaccaggtaggggcacgttgaaacacacacacgggcaacgtaacgatcgctctctc
ccgctcgtaacgatcgctctctcccctcgtaaagctcgctctctctctcccctccccttc
tgtaggtccagctccagtcgtgaccgggacaggtttgaccgcttcgagcggcacgacagc
agtcgtgacgagcgtggtggcagtcgcgacgcccgcccccctatcactaagcgcagcttc
agccgcgagacagaggagcgtaggggcgatagttgcacccctacggaaccccccgtccgg
cgcgtagccagcatgactgacgacagagaccggggaggcagcggtagccggggaggcagc
ggtagccggggaggcagccgtagccggggaggcagcggtagccgggacagggctcccagc
aaggaggttgttgtgaagcgtgagacagcccccacccctccccccgatgctccgaccaaa
ccggccgtgaccgaggaggagctggagaagaagtccagcgccatcatcgaggagtacctc
catctcaatgacatgaaggaggcactgcagtgtgtagtggagctgaacagcgccccgctg
ctctttgtgtttgtgcggaacggtctggagaacactctggagcgcagcgccatcgccaga
gaacgcatgggcctgctgctgcaccagctcatcaaggctggcaccctgcccacaacagag
tactacaaagggctccaagagatcctggaggtggctgaggacatggccatagacatcccc
cacatctggcaatacctgtctgagctcatcaaccccatgctccacgagggaggcatcccc
atgggacagctcttcagagagatctccaagcccctgattcccctgcgtaaggccggtgtg
ctgctggtgcacatcctcaacttactctgtaaagaaatgacccataagaaggtgggcggt
atgtggatggaagcggggctcaactggagagacttcctgccagaggacgaggatgtcaac
aagtttgtgactgaacagaaaattgagtttaccctgggggagaagtcagacgggaccaat
cagaagacaaccatgagtggggaggagcttagcaaacagcttgacagactgatccaggac
aaggctaacaaccagcgcatcagagactgggtccaggccaacctggacgaacagcagacg
tccgccaaccagtttgtgcgctctctgatgacatccatttgccagtcagccgttatatgt
gagaacccatacaaggtggacgtggagcagattacccagagggcaaagctgctgcagcag
tacctgagtgacgagaagaaggaactgcaggccctctatgccctccaggccctcatggtg
cacatggagcaaccggccaatctgctgcggatgttctttgacacgctttacgacgaggac
gtgatcaaagaggaggccttttacaggtgggagtccagcaaagacccagccgagcagact
ggaaagggtgtggccctcaagtcggtcaccgccttcttcacctggctccgtgatgccgaa
gaagagtccgacaaagactaa
DBGET
integrated database retrieval system
