Oncorhynchus nerka (sockeye salmon): 115101596
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Entry
115101596 CDS
T07952
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115101596
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115101596
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115101596
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
115101596
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
O-linked Gal type
115101596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
115101596
NCBI-ProteinID:
XP_029476918
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All DBs
Position
LG20:65692987..65699790
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AA seq
469 aa
AA seq
DB search
MANCFFVDTDNLLTNRRVLTEMIAENVTVVAPMLESRVLYSNFWCGVTPQGYYKRTPEYI
PIRNWKRQGCFAVPMVHSTFMVDLRRSATRALAFHPPHHDYTFPLDDIMVFAFSARRADV
QMYICNREHYGYLPLPLKQEQSLEEEVESFSHTMTEALIDYLMKPSKYMHHTAKPLEKMG
FDEIFLINLKRRIDRRDRMLSTLAVLGIDITLTEAVDGKALNSSQLQAMGIDMLPGYKDP
YSGRVLTRGEIGCFLSHYNIWKQVVEQGLQRVLVLEDDVRFEPRFRSRLVTIMENVDRVG
LDWDLIYVGRKRLQVKQPERWVEGVSNLVHPDYSYWTLGYALSLQGAKRLLGARALGKML
PVDEYLPVMFNKHPREEYMAQFEQRDLLAFSVEPLLLFPTHYTGEPGYFSDTETSTIWDD
EATTTDWDRQNTQRSSKQDGQGRPMPPGIAKEGGGVPSPSSASNQRDEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactgtttttttgtggacactgacaacttgctgaccaaccggcgggtgctgact
gagatgatagcagagaatgtaacggtggtagcgcccatgctggagtcccgcgtcctctac
tccaacttctggtgtggtgtgaccccacagggttactacaagcgcacccctgagtacatc
cccatcaggaactggaaacgccagggctgcttcgctgttcccatggtgcactctaccttc
atggtggacctgaggcggagcgccacccgggcgctggccttccaccctccacaccacgat
tacaccttccccctggatgacatcatggtcttcgccttctctgcgcggcgggcagatgtg
cagatgtacatatgtaatagagagcattatgggtatttgccactgcctctgaagcaagag
caaagtctggaggaggaggtggagagctttagccacaccatgaccgaggctctgatcgat
tacctcatgaagccgtccaaatacatgcaccatacagctaaacctctggaaaagatggga
tttgatgagatctttctgattaatctgaagcgtcgcattgaccggcgggatcgaatgctg
agcacccttgccgttctgggcattgatatcacactgacagaggcggtggatggcaaagcc
ctgaactcgtcccagctgcaagcgatgggcatagacatgttgcctgggtacaaagacccg
tattcggggcgtgtgctgacgcgaggggagatcggctgcttcctcagtcactacaatatc
tggaaacaggtggtggaacagggactgcagcgtgtgctggtgctggaggatgatgtgagg
tttgagccgcgtttccgcagcagactggtgaccatcatggagaacgtggaccgagtggga
ctggactgggatctgatctatgtggggcgtaagcgcctgcaggtgaagcagccggagcgc
tgggtggagggggtcagtaacctggtacaccctgactattcctattggaccctgggctac
gccctctccttgcagggggccaagaggctcctgggagcccgggccctgggcaagatgcta
cctgtggatgagtacctgcctgtcatgttcaacaagcacccacgggaggagtacatggcc
cagtttgagcagagggacctgctggcgttctctgtggagccgctgctcctcttccccacc
cactatactggcgagccgggctacttcagcgacacagagacctccaccatctgggacgat
gaggccacaaccaccgactgggaccggcagaacacccagcgaagcagcaagcaggacggc
cagggacggcctatgcccccaggcatcgccaaggaaggaggaggcgtgccctcaccctcc
tctgccagcaatcaaagagatgaactctga
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