Oncorhynchus nerka (sockeye salmon): 115101738
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Entry
115101738 CDS
T07952
Name
(RefSeq) excitatory amino acid transporter 5-like
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115101738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115101738
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
115101738
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
115101738
NCBI-ProteinID:
XP_029477063
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Position
LG20:39370305..39443787
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AA seq
574 aa
AA seq
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MAVNFAEVRGRVKNVCAQNGLLILSVLAVVIGCMMGFHLRGKQLSDQEVKYFQFPGELLM
RMLKMLILPLVVSSLMSGLAALDAKCSSRLGIMTVSYYLWTTFVAVVVGILMVTIIHPGG
AAQKEDNEDSGKPIMSSADALLDLIRNMFPANLVQATFQQYRTRSIPIMKAPPPTVAASL
MESTTRRVYIYGVQDDNGTDIQNFSLDLTPPPDIQMRTLPGTSDGMNVLGIVIFSATMGI
MLGRMGPNGSALVNFCQSLNEAVLKIVAIVIWYFPFGIVFLVAGKILEMDDPSAMGKKLG
FYAITVVMGLVLHGLFILPAMYFFITKKSPIVYIRGILQALLISLATSSSSATLPITFKC
LLENNHIDRRIIRFVLPVGATINMDGTALYEAVAAIFIAQVNNYELDFGQIITISITATA
ASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWALDRFRTMVNVMGDALATGIMA
HICRKDFVKEGEQVPLICETKPMVSIQQMTYQKNGGYQPPPCGPGGPDVARLMQLEEGVR
PEQRKRNPHAPQHKREHKDKDHCSIDMNGLETNV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaactttgcggaggtgcggggtcgggtgaagaatgtgtgtgcgcagaacggg
ctcctcatcctgtctgtgttggctgtggtcattggctgtatgatggggttccacctgcgg
ggcaagcagctctctgaccaggaggtgaagtacttccagtttcctggagagctcctgatg
aggatgttgaagatgctcattctgcccctcgtcgtctccagtttgatgtcggggctagca
gccttggatgccaagtgttccagccgcctgggcatcatgaccgtctcctactacctgtgg
accacgtttgtggcggtggtggtgggcatcctcatggttaccatcatccacccagggggc
gccgcccagaaggaggacaacgaggacagcggcaagccaatcatgagctccgctgacgcc
ctgcttgatctgattcgaaacatgttcccagccaacttggtccaagcaactttccaacag
taccgtaccaggagtatccccatcatgaaggcccccccacccacggtggcagcctccctg
atggagagcaccacccggagggtctatatctacggtgtccaggacgacaacggcaccgac
atccagaacttctccctggacttgacacctccgcctgacatccagatgcgcacactgccc
gggaccagcgatggcatgaacgtcctggggatcgtcatcttttccgccaccatgggtatc
atgctgggaagaatggggcctaatggcagcgccttggtcaacttctgtcagagtctgaac
gaggctgtcctgaagattgtcgccatagtgatctggtacttccctttcggcattgtgttc
ttggttgccggtaagatcctggagatggacgacccgtcggccatggggaagaagttgggg
ttctacgctatcaccgtggtgatggggctagtgctgcacggtctcttcatcctaccagcc
atgtacttcttcatcaccaagaagagtcccatcgtatacatcaggggcatcctgcaggcc
ctgctcatctccctggcaacctcgtccagctctgccacactgcctataaccttcaagtgc
ctcctggagaacaaccacatcgaccgacgcatcatccgcttcgtactccctgtgggcgcc
accatcaacatggacgggacggcactctatgaggcagtggcggccatcttcatcgcccag
gttaacaactacgagttggactttggccagatcatcactatcagtatcacagccacagct
gccagtattggtgcagctggaattccgcaggcaggactggtcaccatggtgatcgtgcta
acctcagtgggcctgcccactgatgacatcacactcatcattgctgtggattgggcgtta
gaccgtttcaggacaatggtcaacgtgatgggagacgctttggccacggggatcatggct
cacatctgtagaaaagattttgtcaaggagggagagcaggtacctttgatctgcgagacc
aagcccatggtcagcatccagcagatgacgtaccagaagaacggtgggtaccagccccct
ccctgcggaccggggggcccggacgtggctcgtctgatgcagctggaggagggggtacga
ccggagcaaaggaagaggaacccccacgctccccaacacaagagggagcacaaggacaag
gaccactgctccatcgacatgaatggcctggagaccaacgtatag
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