Oncorhynchus nerka (sockeye salmon): 115101828
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Entry
115101828 CDS
T07952
Name
(RefSeq) claudin-1-like
KO
K06087
claudin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03272
Virion - Hepatitis viruses
one04382
Cornified envelope formation
one04514
Cell adhesion molecule (CAM) interaction
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115101828
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115101828
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115101828
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115101828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115101828
04147 Exosome [BR:
one04147
]
115101828
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115101828
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
115101828
Exosomal proteins of colorectal cancer cells
115101828
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Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
TMEM37
DUF6479
Tweety
DUF1218
Motif
Other DBs
NCBI-GeneID:
115101828
NCBI-ProteinID:
XP_029477165
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All DBs
Position
LG20:65522580..65525965
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGFVLSFLGFIGLIASTIMAEWKLSSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLTGMVQGTRGLMVGAILLAGIAILVAMVGMKCTTCLAEDQEKKDKVAL
TGGIVIIIAGLCALVGTSWYGNRIAKEFYDPFTPTNSRYEFGKALFVGWGSACFTIIGGA
FLCCNCSSEGSGKSSRYPPNRSAAPPGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcggggatacagctccttggattcgtcttgtcttttcttggcttcatcggg
ttgatagcatccacgatcatggccgagtggaaactgtcatcctatgctggggacaacatc
ataacggcgcaagccatgtacgaggggctttggaagtcttgtgtgtcacagagcactggt
caaatccagtgtaaagtgtacgattcactgctccaactaacggggatggtgcagggcaca
cgaggtctcatggtgggtgccatcctgttggctggcattgcgatcctggtggccatggtg
ggcatgaagtgtaccacctgtctggctgaggaccaggagaagaaggacaaagttgccctg
actggaggaatcgtcatcattatcgcaggtctgtgtgctctggtggggacttcctggtac
gggaacagaatagcaaaggaattctacgaccccttcactcctacaaattccaggtatgag
tttggcaaggccctgttcgtaggttggggctctgcttgcttcaccatcataggtggagcc
ttcctctgttgcaactgctccagtgaaggctcaggaaagtcctcccgctaccccccgaac
cgctctgctgccccaccaggcagagactacgtctag
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