Oncorhynchus nerka (sockeye salmon): 115101848
Help
Entry
115101848 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: plexin A3-like
KO
K06820
plexin A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115101848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
PSI
PSI_PlexinA-B
DUF2730
Motif
Other DBs
NCBI-GeneID:
115101848
NCBI-ProteinID:
XP_029477183
LinkDB
All DBs
Position
LG20:1666021..1739854
Genome browser
AA seq
1282 aa
AA seq
DB search
MLKTYYVRDSPDSSSSKPVQPAVSSVAAVVLKPGWDLDEDKEDGSHSPPCLPRCTSCVSS
PFPCNWCKYRHICTNNLAECSFQEGRVSSVEGCPQILPTSDILVPAGIIRPITLRARNLP
QPQSGQKNYECVFNIQGKMQRIPAVRFNSSCIQCQNTSYWYDGDETGDLPVDFSVVWDGD
FFIDKPPTMKALLYKCEAQRDSCGLCLKASTAFECGWCLDNKKCLLRQHCQTPEQNWMHP
GRHNVRCSHPRITKIRPLTGPKEGGTRVTIEGENLGLQVREIAHVQVAGVRCNPVTSEYI
SAERIVCDMAEALLPHSPGGPVELCIGVCSAEYRTQSSQTYSFVTPSFNHVHPEKGPVSG
GTRLTISGHHLDAGSTVTVFIAQEECLFVKRTNRDIVCVTPSSLSGSGPASIKLLIDKAE
VTSSDTRYIYTEDPTISSIEPSWSIVNGSTLITVTGTNLLTIQEPKVRAKYAGIQTTNVC
TVVNDSVMTCLAPGIIYTKHQAPESGLHPDEYGFILDHVAALLVLNGTPFTYYPNPTFET
LGNSGIMEVKPGSPIILKGKNLIPPAPGNTRLNYSVMIGETPCLLTVSESQLLCDSPDLT
GEQRVVIMVGGLEYSPGTLHIYSDSTLTLPAIIGIGAGGGVLLIAIIAVLIAYKRKTRDA
DRTLKRLQLQMDNLESRVALECKEAFAELQTDIQELTNDMDGVKIPFLEYRTYTMRVMFP
GIEEHPVLKELDSPANVEKALRLFSQLLHSKMFLLTFIHTLEAQRSFSMRDRGNVASLLM
AALQGRMEYATVVLKQLLADLIEKNLENRNHPKLLLRRTESVAEKMLTNWFTFLLHRFLK
ECAGEPLFMLFCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKQLTLMCIPPEGEA
GTEVPVKVLNCDTVTQVKDKLLDAVYKGIPYSQRPQADDMDLEWRQGRLTRIILQDEDVT
TKIESDWKRLNTLAHYQVADGSLVALVXKQVSAYNIANSFTFTRSLSRYESLLRTSSSPD
SLRSRAPMITPDQETGTKLWHLVKNHEHADQREGDRGSKMVSEIYLTRLLATKGTLQKFV
DDLFETVFSTAHRGSALPLAIKYMFDFLDEQADKRQITDPDVRHTWKSNCLPLRFWVNVI
KNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPNYKSWVE
RYYRDISKMPTISDQDMDAYLVEQSRLHGTEFNTLSALSELYFYINKYKEEILTALDRDG
YCRKHKLRHKLEQAINLMSGSS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaacctattatgtgcgtgattctcccgacagctcctcaagtaagccggtccag
cccgccgtctccagtgtggctgcggtggtgctgaagcctggctgggacctagatgaggat
aaggaggacggctcacactctcccccttgtctccccaggtgcacctcatgcgtgagcagc
cccttcccctgcaactggtgtaaataccgccacatctgcaccaacaacctggcagagtgc
tccttccaggagggacgcgtcagcagtgtggagggctgtccccagatcctgcccaccagt
gacatcctggtacctgcagggatcattcgtccaatcacgctgcgagcccggaacctccct
cagccccagtctggacagaagaactatgagtgtgtgtttaacatccagggcaagatgcaa
cgcatcccagctgtacgcttcaacagctcctgtatccaatgccagaacacctcatactgg
tatgatggggacgagacgggagacctgcctgttgacttctctgtcgtctgggatggagac
ttcttcatcgacaagcctcccaccatgaaagccctgctatataagtgtgaggcccagagg
gacagctgtggcctgtgtctgaaggccagcacagcgtttgagtgtggctggtgcctggac
aacaagaagtgtctcctgaggcagcactgccagacgccggagcagaactggatgcacccc
ggcaggcacaacgtccgctgcagccacccccgcatcaccaagatccgcccgctgacgggg
cccaaagaggggggcacgcgagtgacgatcgagggcgagaacctcgggctgcaagtgcgg
gagatcgcccacgtccaggtggctggagttcgctgtaaccctgtgacctccgagtacatc
agcgctgagaggattgtgtgtgacatggccgaagcgctgctgccccactctccaggcggc
ccggtggagctgtgtatcggggtgtgcagtgcagagtaccgcacccaatcttcccagacg
tactccttcgtgacccccagcttcaaccatgtgcacccggagaagggccccgtgtccggg
gggacccggctgacgatatcaggccatcatctggacgctggtagcaccgtcactgtgttc
atcgcccaggaggagtgtctgtttgttaagaggaccaacagggacattgtgtgtgtgaca
ccatcgtccctgtctggctcagggcctgcgtcaatcaaattgttaatcgacaaagctgag
gtcaccagcagtgacacacgctacatctacacagaggaccccaccatctccagcatcgag
cccagctggagtatagtgaatggtagcaccttgatcaccgtcacaggtaccaacctgctc
accatccaggagcccaaagtccgtgccaagtatgcaggaatacagactactaatgtgtgc
actgtggtgaatgactctgtgatgacctgtctggccccgggtatcatttacaccaagcac
caggccccagagtcaggcctgcaccccgacgagtacggcttcatcctggatcacgtggct
gcgctgctcgttctcaacgggacacctttcacctactatcccaaccccaccttcgaaaca
ctggggaactctgggataatggaggtcaagcccggctctcccattatcctcaaaggcaag
aatttgattccccctgctccgggcaacacccggctgaactacagcgtgatgattggtgaa
acgccctgtctgttaactgtctcggagtctcagctgctctgtgattcgccagacctgacc
ggggagcagagagtcgtgatcatggtgggcggtttggagtactccccaggaacactgcac
atctactccgacagcacccttaccttaccggccatcatcgggatcggagcgggaggaggg
gtgcttctcatcgccatcatcgccgtgctcatcgcctacaagaggaagacccgggatgct
gaccgcaccctgaaacgcctgcagctgcagatggacaacctagagtccagagtggccctg
gagtgtaaagaagcattcgctgagctacagacagacatccaggagctgaccaatgacatg
gacggagtgaagatccccttcctggagtaccgtacctacaccatgagagtcatgttccct
ggcatcgaggagcaccccgtcctcaaggagctggattccccggccaatgtggagaaagcc
ctgcgtctgttcagccagctgctgcacagtaagatgtttctgctgaccttcatccatacc
ctggaggcccagaggtccttctccatgcgggaccgaggaaatgtggcctctctgctcatg
gccgctctgcagggccgcatggagtacgccactgtggtactcaaacagttgctggctgac
ctcatagagaagaacctggagaaccgcaaccaccctaaactgctgctccgacggacggag
tcggtggctgagaagatgctcaccaactggtttacgttcctgctgcatcgcttcctcaag
gagtgtgctggggagcctctgttcatgctgttctgtgccatcaagcagcagatggagaag
ggccctatagacgccatcacaggagaggcgcgctactccctcagtgaggacaagctcatc
cgccagcagattgactacaaacagctgacactgatgtgtatccctccggagggagaggca
ggcaccgaggtcccggtgaaggtgctgaactgtgacacggtcactcaggtgaaggacaag
ctgctggacgctgtgtacaagggcatcccctactcccagagaccccaggctgatgatatg
gacctggagtggcgacaaggaagactgactagaattatccttcaagatgaggacgtcacc
acaaagattgagagtgactggaagaggctcaacaccctggcccactaccaggtggcagat
gggtctttggtagccctggtcnagaagcaggtctctgcctacaacatcgccaactccttt
acattcacccgctctctgagccgttatgagagtctcctgaggacttctagcagcccagac
agcctgcgctcccgggcccccatgatcacccctgaccaggagactggcaccaagctttgg
cacctggtcaagaatcacgagcacgctgaccaacgggagggcgaccgcggcagcaagatg
gtgtctgagatctatctcacccgcctactggccaccaagggaactctgcagaagtttgtg
gatgacctttttgagacggtgttcagcacggcgcaccgcggcagtgccctccctctggcc
atcaagtacatgtttgacttcctggacgagcaggctgacaagaggcagatcactgaccct
gatgtccgtcacacctggaagagcaactgtctccccctgcggttctgggtgaacgtgatc
aagaacccccagtttgtgtttgacatccataagagcagcatcacagacgcctgtctgtct
gtggtggcccagaccttcatggactcctgctccacgtcagagcaccgcctgggcaaggac
tcaccctccaacaagctgctgtatgctaaagacatccccaactacaagagctgggtggag
aggtactacagagatatcagtaagatgcctaccatcagtgaccaggacatggatgcctat
ctggtggagcagtctcgtctccatggcaccgagttcaacactctcagtgctctcagtgag
ctctacttctacattaacaagtacaaagaggagattttgaccgcactagacagggatggg
tactgccgcaaacacaagctgcgacacaaactggaacaagccattaacctgatgtcgggc
agcagctga
DBGET
integrated database retrieval system
