Oncorhynchus nerka (sockeye salmon): 115102026
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Entry
115102026 CDS
T07952
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115102026
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115102026
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115102026
Protein kinases [BR:
one01001
]
Serine/threonine kinases: Other
Other
115102026
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115102026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
LisH
Beta-prop_WDR19_1st
ANAPC4_WD40
WAPL
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
115102026
NCBI-ProteinID:
XP_029477381
LinkDB
All DBs
Position
LG20:complement(5222416..5246954)
Genome browser
AA seq
1571 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEKWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECVLGHLLKILFKDDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQEAEQPLMIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQAKDTENRKEFKRPSPRKALGEPLLPLDEETVDGGFEDTPFSSGNNGTERVEK
GPEEDREENPFPPGNNRTEKGPEEDIEESPFPSNESDNSSHKISSCTSSSIKGLMKPVSA
PQSLSHRDFPDGRAEGSSHLKRRAERENGRKVKQKLNFSLPEPERNFSELSNSSWSEMSP
WVIGNNYHLYPLTPEMEQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQ
LTFEALKYLASLLLHKKFAAQFVAHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMER
VCMLPHSILSDVVSYTLWLLECSHASGCCHATMFFSISFSYRAVLELFDRQDGLRRLVNL
ISTLEILNPEDQAALLSDDQIFSSRQTAKHTCMALRRFFEAHLAIKVEQVKQSLQRTEGG
APIHPQPYYKACSYTHEQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACD
WRTYYGRSDTVRYALDILSILTVIPKTQLLMAESVAVPDGEGGNAVSTVGMSVVLLVAEG
EVFVNDAEIQKSALQVVINCVCAPDKRMSSIGKFISGTPRRRLPQTTKSSESVLSKMWNV
VQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQ
LMKEPVLQDKRSEHVKFCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEK
ELLLLIRNHLVAKGLHDTATTLTKEADLPMAILPHPSSSALLPVVVPPPPASPAPALPRT
PRLANGVAARLASHGSHPSMPLSVQPRPSTSQLLALPPAAPPLLTPHQSNGSPLIGRIVF
TRERPSPCPVPVSCKKPRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQ
HARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHL
IFSRFRPMSVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHS
SAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGT
KEHIAHIYDIQTGQKTLTLNYPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSARAIHKF
DKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQA
DDDDDIMEMQTKTPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSV
NTDTVCRLYEVGRQRLAEEEEDEDDQEDDDQDDDDDDDDDDSDDDMDTDPLIAELDNENG
EDEEDEEDGNNELSLSDDEVSRLLEGDGEEEDDDDDDDSDDDEEDGDLAQDNTDSSDNSD
LEDDIILSLNE
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgactgctctgctggagcat
tggttggagaagtgggagggggagcagcaggctagcacaccagacctggttaacatcctc
accaagatctcagagctggtggagagggagactgaggaatatcacaaagctgatcctgat
ccttttgatgacaggcaccctgggagagctgatccagaatgcgtcttgggtcatctgctt
aagatcctgttcaaagatgatgacttcatgaatgcgctggtgaatagctatgtgatgacc
agcagagagctcacccttaacacggcagcctgtcgcttgctgcagaacatcatgcctggg
ttggagaccgctgtggtctttcaggagaaggagggcatagtggagaggctgtttaaatgg
gcccaggaggctgagcaacccctgatgatctatgccacgggcctgctggctggagccatg
gagaaccaggacatcgctgccaactacagggaggagaactcagtcctggtgcctttaatg
ctgcagcggctacgtgagctgcaggccaaggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaaggccctgggggaacctctccttcctctggatgaggagactgttgac
ggaggcttcgaggacaccccgttctcctctgggaataacggcacagagagggtggagaag
ggaccagaggaggacagagaggagaaccccttccccccagggaataacagaacagagaag
ggaccagaggaggacatagaggagagcccattccccagcaatgagtctgacaactcttcc
cacaagatcagcagctgcaccagctcgtccattaaaggcctgatgaaacctgtgtctgcc
ccgcagtctctgtcccaccgggacttcccagatggcagggcggagggcagcagtcacctc
aagaggagggcagagagggagaatggacggaaggtgaaacagaagctgaacttctccctg
ccggagccggagaggaacttcagcgagctgtccaacagcagctggtctgagatgagcccc
tgggtgattgggaacaactatcacctttaccctctgaccccagagatggagcagaggctc
atcctacagtacctcacccctctgggggagtaccaggagctgttggctgtcttcatgcag
atgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgatgtacag
ctcacctttgaggctctcaagtacctggcctccctgctcctgcataagaagtttgcagcc
cagtttgtggcccatggaggagttcagaagcttctggagatccccaagccttccatggcc
gccacaggggtgtctctgtgcctctactacctggcctacaaccaggatgccatggagagg
gtgtgtatgctgcctcactccatcctgtctgacgtggtgagctacactctgtggctgttg
gagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatttccttctcc
taccgagccgtgctggagctcttcgacaggcaggacggcctccgacgcctcgtcaacctg
ataagtacgctggagatcttaaaccctgaagaccaggcggccctactgagtgatgaccag
atcttctccagcaggcagacagccaagcacacctgcatggccctgcgcaggttcttcgag
gcccatctggccatcaaggtggagcaggtcaagcagtccctgcagcggactgaggggggc
gctcccattcaccctcagccctactacaaggcgtgcagctacacccatgagcaggtggtg
gagatgatggagttcctgatcgagtacggcccagtcagattgtactgggagccagctgag
gtcttccacaagctgtcctgtgttcagctgctgctgcagctcatctccattgcttgtgac
tggaggacctactatggcaggagtgacacagtgcgttatgccctggacatactgagcatc
ctgacggtgatcccgaagacccagctgctgatggctgagtctgtggctgtgccagatggg
gaggggggtaatgcagtctccaccgtgggtatgagtgtagtcctgttggtggcggaggga
gaggtgtttgtgaacgacgccgagatccagaagtctgctctgcaggtggtcatcaactgt
gtgtgtgctccggacaaacgcatgtccagcatcggcaagttcatctcgggcactcctcgc
agacgcctgccccagactaccaagagcagcgagagcgtgctcagcaagatgtggaacgtg
gtgcagtctaacaacggcatcaaggtgctcctgtccctgctgacggtgaagatgcccatc
acagatgcggatcaaatccgggccctggcctgtaaggccctggtgggtctgtcccgctcc
agctcagtcagacagattatcagcaagctgcctctcttcagcagcggacacatccagcag
cttatgaaggagcctgtgctccaagacaaacgcagcgaacacgtcaaattctgcaagttt
gcggcagagctcatcaagcgagtgtctggtaaacccctcatgatagggacggatgtgtcc
ctggcctggctgcagagggctaatgtggtggcccagtccaggatctccttccctgagaag
gagctactgctgttgatccggaaccacctggtggccaaaggcctgcatgacacggccacc
acactcaccaaggaggccgatctccccatggccatcctcccccacccatcttcctcagct
ttacttcctgtcgttgttccccctcctcctgcctctcctgcccctgccctcccccggacc
cctcggctggccaatggggttgcagcgcggttggcgagccacggctctcatccgtccatg
ccgttgtcagttcagccccgtccctcgacatcgcaactcctcgcactccctccggccgcc
cctcccctgttgacccctcaccaaagcaacggctctcccctaattggtcggatcgtgttc
acgcgagagcgcccgtcgccatgccccgtgcctgtcagctgtaagaagccgcgggtgctg
aggcagaagtcagattacggtgccttcagccagagtccagccatgaagaaacagctggac
agacacctgccctctccccccgccctggacagcatcatcacagagtacctgagggagcag
cacgcgcgctgcaagaaccctgtcaccacctgcccccctttctcccttttcaccccccac
cagtgccccgaacccaagcagaggcgccaggccccaaccaacttcacctcccgaaacaca
cgcagggtcgtctaccccaagtatggaggggtggacgggggctgcttcgacagacacctc
atctttagcaggtttcgtcccatgtctgtgttcagagaggcagatgaggatgagagtggg
ttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgtacgggc
cagctcaaactctacaatgtgttcacaggccaggaggaggcgagctacagctgccacagc
tctgccatcacacacctagagccatcacgggatggctctctgttgttgacatcggcatca
tggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatcatgaagcattcc
ttcttagatgatcattatgtagagttcagcaaactctcacaagaccgagttattggcaca
aaggaacacatagcccacatctatgacatccagacggggcagaaaaccctgaccctcaac
tacccggacctggccaataactacaagaggaactgtgcgacctttaaccccactgacgac
ctggtgctgaacgacggtgtactgtgggacgtgcgctcggctcgtgccatccacaagttt
gacaagttcaacatgaacatcagtggagtgttccaccccaatggcctggaggtcatcgtc
aacactgagatttgggacctgcggacttttcacctcctccatacagtgccagctctggac
cagtgtaggatcgtcttcaacaacaacggcacggtcatctacggagcgatgctccaggca
gatgatgatgatgacattatggagatgcagacgaagactccctttggctcctccttcagg
acgttcaacgccaccgactacaaacccattgccaccattgacgtgaagaggaatatcttt
gacctctgcacagacaccaaggactgctacctggctgtgattgagaaccaggactcggtc
aacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgaagaggag
gaggatgaagatgatcaggaggatgacgatcaagacgatgacgatgatgatgatgatgat
gactctgatgatgacatggacacggaccctctgatcgctgagctggataacgaaaacggg
gaggatgaggaagacgaggaagacgggaacaatgaattatctctctccgacgatgaggtg
tctcgcctgctggagggggatggagaggaggaggatgatgatgatgatgatgactctgat
gacgatgaggaagatggggaccttgcccaggataacacagacagctctgacaactctgac
cttgaggatgacatcatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
