Oncorhynchus nerka (sockeye salmon): 115102040
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Entry
115102040 CDS
T07952
Name
(RefSeq) mimecan-like
KO
K08126
osteoglycin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115102040
Proteoglycans [BR:
one00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
115102040
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
115102040
NCBI-ProteinID:
XP_029477415
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All DBs
Position
LG20:complement(5604241..5607074)
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AA seq
270 aa
AA seq
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MIDLRTLFFTIILVPWMLSSAARNGYMEARKPKKEVVTIPDYDTTGDSDTSPAAAPKDEG
ELPTCLLCVCLTGSVYCEEVSPEMTAVPSLPKETAYLYARYNKITKITNKDFADIATLRR
IDLTGNLISEIEDGAFSKLALLEELNLSENKLAKLPMLPAKLISFNANYNQLKTKGIKST
AFKKLTKMAYLYLGNNELEAIPQLPESLHIVHLYNNKITTLSDETFCQGNNTQYIRANME
EVRLDGNPLMLAKHPNSFVCLRALPIGLYH
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgatagacctgaggactttgtttttcaccattattctggtaccgtggatgctctcttct
gcagcaagaaatggatacatggaagcaaggaaacctaagaaagaggttgtgaccatccca
gactatgacaccactggagactcagatacaagcccagcagcagctccgaaagatgagggt
gagctgcccacgtgcctactgtgtgtgtgtctgactgggtcagtatactgtgaggaggtc
tcccctgagatgacagcagttccatccctgcccaaggaaactgcctatctctacgcacgc
tacaacaaaatcacaaaaatcaccaacaaagactttgcagacattgcaactttgagaaga
atcgatctgactgggaacctcatctctgagatagaagacggagctttctcaaagcttgcc
ctccttgaagagctcaatctctcagagaacaagctggccaaactacccatgttacctgcc
aaactcatatccttcaatgccaattacaaccagcttaaaaccaagggtataaagtcaact
gcttttaagaaactcaccaagatggcgtacctctaccttggcaataacgagctggaggca
atcccacaacttccagagagtctccacattgtgcacctatataacaataagatcaccacg
ctatcggatgagaccttctgccaaggcaacaacactcagtacatcagagccaacatggag
gaggtgagactggatggcaaccctctgatgctggccaagcatcccaacagctttgtttgc
ctcagggccctgcccattggactgtaccactga
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